RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 VN1R5Q7Z5H4 357 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 CROCCP3Q8IVE0 287 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 CYP4Z2PQ8N1L4 340 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 CT55Q8WUE5 264 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 IPCEF1Q8WWN9 437 aaPredicted RBP11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 COQ8BQ96D53 544 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 SIGLEC11Q96RL6 698 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 ATP13A2Q9NQ11 1180 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 PCDHGB1Q9Y5G3 927 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 EYSQ5T1H1 3165 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 NBASA2RRP1 2371 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 AGR2O95994 175 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 NUDT7P0C024 238 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 CCNA2P20248 432 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 EPHA2P29317 976 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 TMED10P49755 219 aaKnown RBP11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 RNF144AP50876 292 aaPredicted RBP11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 RRADP55042 308 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 GP2P55259 537 aaKnown RBP11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 POU6F2P78424 691 aaPredicted RBP11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 AQP6Q13520 282 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 MPEG1Q2M385 716 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 DEFB109BQ30KR1 87 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 LINC00696Q6ZRV3 163 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 CBLL1Q75N03 491 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 VTCN1Q7Z7D3 282 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 GALNT5Q7Z7M9 940 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 HMGN2P46Q86SG4 172 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 PEX5LQ8IYB4 626 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 ZNF563Q8TA94 476 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 MUL1Q969V5 352 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 SENP5Q96HI0 755 aaPredicted RBP11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 COL21A1Q96P44 957 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 PILRAQ9UKJ1 303 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 SLC1A7O00341 560 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 NME6O75414 186 aaPredicted RBP11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 DNAJB5O75953 348 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 GADD45GO95257 159 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 SSTR4P31391 388 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 TMBIM6P55061 237 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 NFATC3Q12968 1075 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 DCTN2Q13561 401 aaKnown RBP11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 LAPTM4AQ15012 233 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 RGNQ15493 299 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 ANKDD1AQ495B1 522 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 CDC73Q6P1J9 531 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 LINC00471Q8N535 108 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 OR14A16Q8NHC5 309 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 VANGL1Q8TAA9 524 aaPredicted RBP11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 ASB15Q8WXK1 588 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 C10orf90Q96M02 699 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 ANKRA2Q9H9E1 313 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 PTGFRNQ9P2B2 879 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 POFUT2Q9Y2G5 429 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 WDR45Q9Y484 360 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 TESMINQ9Y4I5 508 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 H3BN98 237 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 RGS10O43665 173 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 ZFAND5O76080 213 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 TIAF1O95411 115 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 HMGN2P05204 90 aaKnown RBP11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 SLC35E2P0CK97 266 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 ATP6V1E1P36543 226 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 CDH12P55289 794 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 PLGLB1Q02325 96 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 CDK5R2Q13319 367 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 TUBA3CQ13748 450 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 ZNF385BQ569K4 471 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 DCST1Q5T197 706 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 PIWIL3Q7Z3Z3 882 aaKnown RBP11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 GATSQ8NAP1 163 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 NFKBIDQ8NI38 313 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 SLC22A8Q8TCC7 542 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 FGF11Q92914 225 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 DCUN1D5Q9BTE7 237 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 PRAMEF25A6NGN4 478 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 ICAM2P13598 275 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 ZNF28P17035 718 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 MAGEA8P43361 318 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 PCBP4P57723 403 aaKnown RBP11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 HBA1P69905 142 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 RELAQ04206 551 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 FCRLBQ6BAA4 426 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 LANCL3Q6ZV70 420 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 OR10G2Q8NGC3 310 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 VN1R1Q9GZP7 353 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 OR51I1Q9H343 314 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 GLIPR2Q9H4G4 154 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 NTN3O00634 580 aaPredicted RBP11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 AP3D1O14617 1153 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 DPM1O60762 260 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 KCNJ10P78508 379 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 CHAF1BQ13112 559 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 BIKQ13323 160 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 TIMM50Q3ZCQ8 353 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 KANSL1Q7Z3B3 1105 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 CDK20Q8IZL9 346 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 SIRT6Q8N6T7 355 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 ZFP90Q8TF47 636 aa11.59□□□□□ -0.55
SYNGAP1-207ENST00000628646 ALKBH4Q9NXW9 302 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms