RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 CEP170Q5SW79 1584 aa2.19□□□□□ -2.06
VBP1-204ENST00000625964 PRG4Q92954 1404 aaPredicted RBP2.18□□□□□ -2.06
VBP1-204ENST00000625964 H0YL77 283 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 DDX39AO00148 427 aaKnown RBP2.18□□□□□ -2.06
VBP1-204ENST00000625964 ALOX15BO15296 676 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 TM9SF1O15321 606 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 ADAM12O43184 909 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 TBL1XO60907 577 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 CXCL10P02778 98 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 CD55P08174 381 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 HOXC4P09017 264 aaPredicted RBP2.18□□□□□ -2.06
VBP1-204ENST00000625964 NR2C1P13056 603 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 TSPAN8P19075 237 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 CCNA2P20248 432 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 RBMXP38159 391 aaKnown RBP2.18□□□□□ -2.06
VBP1-204ENST00000625964 HTR5AP47898 357 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 EMDP50402 254 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 CBX3Q13185 183 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 ORC2Q13416 577 aaPredicted RBP2.18□□□□□ -2.06
VBP1-204ENST00000625964 KCNJ11Q14654 390 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 KARSQ15046 597 aaKnown RBP2.18□□□□□ -2.06
VBP1-204ENST00000625964 IL17AQ16552 155 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 ZNF658BQ4V348 819 aaPredicted RBP2.18□□□□□ -2.06
VBP1-204ENST00000625964 METTL11BQ5VVY1 283 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 OR5M10Q6IEU7 315 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 SLC39A4Q6P5W5 647 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 FAM159AQ6UWV7 190 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 CXCL17Q6UXB2 119 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 BTNL3Q6UXE8 466 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 OR52E1Q8NGJ3 308 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 ANKRD49Q8WVL7 239 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 ATP6V0A1Q93050 837 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 PLEKHF1Q96S99 279 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 KCNN3Q9UGI6 736 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 DNPEPQ9ULA0 475 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 PPIAL4AQ9Y536 164 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 DNMBPQ6XZF7 1577 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 PTPRMP28827 1452 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 ARHGAP23Q9P227 1491 aa2.18□□□□□ -2.06
VBP1-204ENST00000625964 ARHGAP42A6NI28 874 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 SAGE2PA6NJ88 616 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 TMEM110-MUSTN1A8MSY1 372 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 CASKO14936 926 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 ZBTB14O43829 449 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 LYPLA1O75608 230 aaPredicted RBP2.17□□□□□ -2.06
VBP1-204ENST00000625964 STSP08842 583 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 HLA-DPA1P20036 260 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 MDKP21741 143 aaPredicted RBP2.17□□□□□ -2.06
VBP1-204ENST00000625964 AHCYP23526 432 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 PRDX6P30041 224 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 PRDX2P32119 198 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 CDH5P33151 784 aaPredicted RBP2.17□□□□□ -2.06
VBP1-204ENST00000625964 HSPA1LP34931 641 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 GPC3P51654 580 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 OC90Q02509 493 aaPredicted RBP2.17□□□□□ -2.06
VBP1-204ENST00000625964 CCDC14Q49A88 953 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 WDR88Q6ZMY6 472 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 Q7L0L9 218 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 TMEM110Q86TL2 294 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 BPIFB2Q8N4F0 458 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 MSANTD4Q8NCY6 345 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 NEIL2Q969S2 332 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 ELMO2Q96JJ3 720 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 NICN1Q9BSH3 213 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 SYTL2Q9HCH5 934 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 PLA2G4CQ9UP65 541 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 NUP160Q12769 1436 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 PCF11O94913 1555 aaKnown RBP2.17□□□□□ -2.06
VBP1-204ENST00000625964 KRTAP4-16G5E9R7 235 aaPredicted RBP2.17□□□□□ -2.06
VBP1-204ENST00000625964 H3BTX0 84 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 SCRG1O75711 98 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 MMP23AO75900 390 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 SLC4A1P02730 911 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 IGKV3-11P04433 115 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 GSTT2P0CG29 244 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 GSTT2BP0CG30 244 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 ZNF17P17021 662 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 ZNF32P17041 273 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 VDAC1P21796 283 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 PTPN6P29350 595 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 AKT2P31751 481 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 RPL4P36578 427 aaKnown RBP2.17□□□□□ -2.06
VBP1-204ENST00000625964 DHPSP49366 369 aaPredicted RBP2.17□□□□□ -2.06
VBP1-204ENST00000625964 OTUD4Q01804 1114 aaKnown RBP2.17□□□□□ -2.06
VBP1-204ENST00000625964 ZNF45Q02386 682 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 ELAVL3Q14576 367 aaKnown RBP2.17□□□□□ -2.06
VBP1-204ENST00000625964 CCDC40Q4G0X9 1142 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 SULT1C3Q6IMI6 304 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 OLFM4Q6UX06 510 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 MIER3Q7Z3K6 550 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 IFNEQ86WN2 208 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 MKXQ8IYA7 352 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 ENTHD1Q8IYW4 607 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 ARNTL2Q8WYA1 636 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 MCHR2Q969V1 340 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 ADIPOR1Q96A54 375 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 SLC25A36Q96CQ1 311 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 ATP6V0BQ99437 205 aa2.17□□□□□ -2.06
VBP1-204ENST00000625964 WRAP53Q9BUR4 548 aaKnown RBP2.17□□□□□ -2.06
VBP1-204ENST00000625964 OR51J1Q9H342 316 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms