RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 LYVE1Q9Y5Y7 322 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 AP4B1Q9Y6B7 739 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 KIF26BQ2KJY2 2108 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.47□□□□□ -1.37
CBWD3-219ENST00000622817 SAGE2PA6NJ88 616 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 J3KTA2 159 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 M0R3H8 397 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 TO15178 435 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 DKK1O94907 266 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 GADD45GO95257 159 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 EPPINO95925 133 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 IGKV1D-16P01601 117 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 IFNA8P32881 189 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 RFX3P48380 749 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 GPR143P51810 404 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 LIMK1P53667 647 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 CLDN6P56747 220 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 RGS8P57771 180 aaPredicted RBP6.47□□□□□ -1.37
CBWD3-219ENST00000622817 FOXL2P58012 376 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 EEF1A1P68104 462 aaKnown RBP6.47□□□□□ -1.37
CBWD3-219ENST00000622817 PPP2R2BQ00005 443 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 EPS8Q12929 822 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 PPP1R8Q12972 351 aaKnown RBP6.47□□□□□ -1.37
CBWD3-219ENST00000622817 MED21Q13503 144 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 EBPQ15125 230 aaKnown RBP6.47□□□□□ -1.37
CBWD3-219ENST00000622817 ZNF141Q15928 474 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 NNATQ16517 81 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 MAPK14Q16539 360 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 RFX4Q33E94 735 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 NHSL2Q5HYW2 709 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 COLEC12Q5KU26 742 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 C6orf52Q5T4I8 152 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 RNF220Q5VTB9 566 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 FAM199XQ6PEV8 388 aaPredicted RBP6.47□□□□□ -1.37
CBWD3-219ENST00000622817 PAPD4Q6PIY7 484 aaKnown RBP6.47□□□□□ -1.37
CBWD3-219ENST00000622817 ZNF836Q6ZNA1 936 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 ZNF605Q86T29 641 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 SLCO6A1Q86UG4 719 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 COMTD1Q86VU5 262 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 C9orf40Q8IXQ3 194 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 HS3ST5Q8IZT8 346 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 CACTIN-AS1Q8N1I8 211 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 CLIP4Q8N3C7 705 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 PIK3C3Q8NEB9 887 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 C17orf47Q8NEP4 570 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 NFAM1Q8NET5 270 aaPredicted RBP6.47□□□□□ -1.37
CBWD3-219ENST00000622817 OR4D11Q8NGI4 311 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 OR4C15Q8NGM1 316 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 OR6T1Q8NGN1 323 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 OR2Y1Q8NGV0 311 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 GIPC3Q8TF64 312 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 PHF10Q8WUB8 498 aaKnown RBP6.47□□□□□ -1.37
CBWD3-219ENST00000622817 OIT3Q8WWZ8 545 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 ADIPOR1Q96A54 375 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 ZNF570Q96NI8 536 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 GAL3ST4Q96RP7 486 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 SEMA4CQ9C0C4 833 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 WWTR1Q9GZV5 400 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 HOXD1Q9GZZ0 328 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 NXF5Q9H1B4 397 aaKnown RBP6.47□□□□□ -1.37
CBWD3-219ENST00000622817 NMNAT1Q9HAN9 279 aaPredicted RBP6.47□□□□□ -1.37
CBWD3-219ENST00000622817 SMURF2Q9HAU4 748 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 ACER3Q9NUN7 267 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 ACAD8Q9UKU7 415 aa6.47□□□□□ -1.37
CBWD3-219ENST00000622817 KNTC1P50748 2209 aa6.46□□□□□ -1.37
CBWD3-219ENST00000622817 WDFY4Q6ZS81 3184 aa6.46□□□□□ -1.37
CBWD3-219ENST00000622817 IGHV3-20A0A0C4DH32 117 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 PROB1E7EW31 1015 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 NPIPB9F8W1W9 429 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 PEX12O00623 359 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 DLGAP1O14490 977 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 AP3D1O14617 1153 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 FFAR1O14842 300 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 UGT2B17O75795 530 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 IL33O95760 270 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 DLGAP3O95886 979 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 IGHEP01854 428 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 H1F0P07305 194 aaKnown RBP6.46□□□□□ -1.38
CBWD3-219ENST00000622817 FTH1P19P0C7X4 201 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 THRBP10828 461 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 CSRP1P21291 193 aaKnown RBP6.46□□□□□ -1.38
CBWD3-219ENST00000622817 PRKACGP22612 351 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 FOLR3P41439 243 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 LIMS1P48059 325 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 ATP12AP54707 1039 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 RAD23AP54725 363 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 MERTKQ12866 999 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 GANABQ14697 944 aaKnown RBP6.46□□□□□ -1.38
CBWD3-219ENST00000622817 NPTX1Q15818 432 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 MICAQ29983 383 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 EXOC3L2Q2M3D2 409 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 PDZK1Q5T2W1 519 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 MRPL2Q5T653 305 aaKnown RBP6.46□□□□□ -1.38
CBWD3-219ENST00000622817 HSDL2Q6YN16 418 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 ZAR1Q86SH2 424 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 RANBP3LQ86VV4 465 aaPredicted RBP6.46□□□□□ -1.38
CBWD3-219ENST00000622817 RBM45Q8IUH3 476 aaKnown RBP6.46□□□□□ -1.38
CBWD3-219ENST00000622817 LACC1Q8IV20 430 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 TAGAPQ8N103 731 aa6.46□□□□□ -1.38
CBWD3-219ENST00000622817 DHRSXQ8N5I4 330 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms