RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 C18orf25Q96B23 403 aaPredicted RBP3.85□□□□□ -1.79
CPNE3-213ENST00000622183 SDSLQ96GA7 329 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 TTC25Q96NG3 672 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 ZSCAN5AQ9BUG6 496 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 HCAR1Q9BXC0 346 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 RHOJQ9H4E5 214 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 TIGARQ9NQ88 270 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 ZNF581Q9P0T4 197 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 PAK5Q9P286 719 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 CRLS1Q9UJA2 301 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 MAB21L2Q9Y586 359 aa3.85□□□□□ -1.79
CPNE3-213ENST00000622183 MBLAC1A4D2B0 266 aaPredicted RBP3.84□□□□□ -1.79
CPNE3-213ENST00000622183 ZNF840PA6NDX5 716 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 ZSCAN5BA6NJL1 495 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 K7EQM0 130 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 STX7O15400 261 aaKnown RBP3.84□□□□□ -1.79
CPNE3-213ENST00000622183 OR1F1O43749 312 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 ADCY5O95622 1261 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 IGHDP01880 384 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 IGF1P05019 195 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 UGT2B4P06133 528 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 CT45A10P0DMU9 189 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 PDHBP11177 359 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 CPN1P15169 458 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 TPSB2P20231 275 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 HMGCLP35914 325 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 MAGEA5P43359 124 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 ALDH3B2P48448 385 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 RPL34P49207 117 aaKnown RBP3.84□□□□□ -1.79
CPNE3-213ENST00000622183 PPT1P50897 306 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 GBX2P52951 348 aaPredicted RBP3.84□□□□□ -1.79
CPNE3-213ENST00000622183 CBX1P83916 185 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 SPIBQ01892 262 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 BDH1Q02338 343 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 CSTF1Q05048 431 aaKnown RBP3.84□□□□□ -1.79
CPNE3-213ENST00000622183 IL18R1Q13478 541 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 GPM6BQ13491 265 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 SELPLGQ14242 412 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 TPSAB1Q15661 275 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 CYP51A1Q16850 503 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 RGS9BPQ6ZS82 235 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 TMEM110Q86TL2 294 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 HIPK1Q86Z02 1210 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 BPIFB2Q8N4F0 458 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 FAM133AQ8N9E0 248 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 ZNF606Q8WXB4 792 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 ZBED6CLQ96FA7 236 aaPredicted RBP3.84□□□□□ -1.79
CPNE3-213ENST00000622183 ZNF607Q96SK3 696 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 ATOH8Q96SQ7 321 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 OPN3Q9H1Y3 402 aaPredicted RBP3.84□□□□□ -1.79
CPNE3-213ENST00000622183 PNNQ9H307 717 aaKnown RBP3.84□□□□□ -1.79
CPNE3-213ENST00000622183 CLEC5AQ9NY25 188 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 EHFQ9NZC4 300 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 PRODH2Q9UF12 536 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 KIF16BQ96L93 1317 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 KDRP35968 1356 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 ATP10DQ9P241 1426 aa3.84□□□□□ -1.79
CPNE3-213ENST00000622183 ATAD2BQ9ULI0 1458 aa3.84□□□□□ -1.8
CPNE3-213ENST00000622183 TRAV9-2A0A087WT02 112 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 E9PAM4 449 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 EFNA2O43921 213 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 B3GAT3O94766 335 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 PIGRP01833 764 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 HBQ1P09105 142 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 ALPIP09923 528 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 H2AFZP0C0S5 128 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 FAM200BP0CF97 657 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 FOLR2P14207 255 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 GLRA2P23416 452 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 SHC1P29353 583 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 ACVR1BP36896 505 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 BDKRB1P46663 353 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 NOVA1P51513 510 aaKnown RBP3.83□□□□□ -1.8
CPNE3-213ENST00000622183 PLA2G16P53816 162 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 HMGCS2P54868 508 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 CHIT1Q13231 466 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 TMEM52BQ4KMG9 183 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 SPATA46Q5T0L3 261 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 TTC23Q5W5X9 447 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 PYHIN1Q6K0P9 492 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 CASC1Q6TDU7 716 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 ZNF600Q6ZNG1 722 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 TFB1MQ8WVM0 346 aaKnown RBP3.83□□□□□ -1.8
CPNE3-213ENST00000622183 MCCC1Q96RQ3 725 aaPredicted RBP3.83□□□□□ -1.8
CPNE3-213ENST00000622183 OMDQ99983 421 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 TM2D1Q9BX74 207 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 GORASP2Q9H8Y8 452 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 DHRS4-AS1Q9P1J3 65 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 RNF14Q9UBS8 474 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 MRPS33Q9Y291 106 aaKnown RBP3.83□□□□□ -1.8
CPNE3-213ENST00000622183 WDR45Q9Y484 360 aa3.83□□□□□ -1.8
CPNE3-213ENST00000622183 CLRN2A0PK11 232 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 SRRM5B3KS81 715 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 SAP18O00422 153 aaKnown RBP3.82□□□□□ -1.8
CPNE3-213ENST00000622183 SLC17A2O00624 439 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 PHF1O43189 567 aaPredicted RBP3.82□□□□□ -1.8
CPNE3-213ENST00000622183 SRPX2O60687 465 aaPredicted RBP3.82□□□□□ -1.8
CPNE3-213ENST00000622183 ZNF253O75346 499 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 GJB5O95377 273 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 HPP00738 406 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms