RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 C6orf132Q5T0Z8 1188 aa18.29■□□□□ 0.52
PDLIM3-212ENST00000620787 FAM27D1Q5T7N8 215 aa18.29■□□□□ 0.52
PDLIM3-212ENST00000620787 GLRX5Q86SX6 157 aa18.29■□□□□ 0.52
PDLIM3-212ENST00000620787 OR8H3Q8N146 312 aa18.29■□□□□ 0.52
PDLIM3-212ENST00000620787 BABAM2Q9NXR7 383 aa18.29■□□□□ 0.52
PDLIM3-212ENST00000620787 H2AFY2Q9P0M6 372 aaPredicted RBP18.29■□□□□ 0.52
PDLIM3-212ENST00000620787 ZNF624Q9P2J8 865 aaPredicted RBP18.29■□□□□ 0.52
PDLIM3-212ENST00000620787 SLC13A4Q9UKG4 626 aa18.29■□□□□ 0.52
PDLIM3-212ENST00000620787 SPEF1Q9Y4P9 236 aa18.29■□□□□ 0.52
PDLIM3-212ENST00000620787 TEX51A0A1B0GUA7 166 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 SOX30O94993 753 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 SERPIND1P05546 499 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 CXCL3P19876 107 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 OR10A3P58181 314 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 SHC2P98077 582 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 CD276Q5ZPR3 534 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 SFXN4Q6P4A7 337 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 CXXC5Q7LFL8 322 aaKnown RBP18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 KRT74Q7RTS7 529 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 TMEM99Q8N816 258 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 OR5K2Q8NHB8 316 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 ZFPM2Q8WW38 1151 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 OR7D2Q96RA2 312 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 ALG8Q9BVK2 526 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 OR51J1Q9H342 316 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 SLC23A2Q9UGH3 650 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 CCL16O15467 120 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 PQBP1O60828 265 aaKnown RBP18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 PDGFAP04085 211 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 TBXA2RP21731 343 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 ENPP1P22413 925 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 BHLHB9Q6PI77 547 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 LSRQ86X29 649 aaPredicted RBP18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 ACBD7Q8N6N7 88 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 OR2T33Q8NG76 320 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 CNRIP1Q96F85 164 aaPredicted RBP18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 SAMD8Q96LT4 415 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 PITHD1Q9GZP4 211 aaPredicted RBP18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 DPAGT1Q9H3H5 408 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 ENTPD4Q9Y227 616 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 NUBP2Q9Y5Y2 271 aa18.28■□□□□ 0.52
PDLIM3-212ENST00000620787 A0A0G2JK05 382 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 A0A1W2PS29 197 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 ZC3H12DA2A288 527 aaKnown RBP18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 PGRMC2O15173 223 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 CSNK1G2P78368 415 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 ARHGEF6Q15052 776 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 PLEKHM3Q6ZWE6 761 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 GDF7Q7Z4P5 450 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 CCDC116Q8IYX3 515 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 OR56A1Q8NGH5 318 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 TMEM255BQ8WV15 326 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 ARRDC3Q96B67 414 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 OR2M2Q96R28 347 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 FAIM2Q9BWQ8 316 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 KLHL31Q9H511 634 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 ERVMER34-1Q9H9K5 563 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 PTTG3PQ9NZH4 202 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 TEX13CA0A0J9YWL9 993 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 GSAPA4D1B5 854 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 C4orf51C9J302 202 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 CDC42EP2O14613 210 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 VEGFDO43915 354 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 STATHP02808 62 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 TCRBP04435 133 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 HMGN1P05114 100 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 DPTQ07507 201 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 RPA4Q13156 261 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 HACD4Q5VWC8 232 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 PYHIN1Q6K0P9 492 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 MBOAT2Q6ZWT7 520 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 SORCS2Q96PQ0 1159 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 TBX5Q99593 518 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 PCBD2Q9H0N5 130 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 MOSPD1Q9UJG1 213 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 NUP50Q9UKX7 468 aa18.27■□□□□ 0.52
PDLIM3-212ENST00000620787 LRIT2A6NDA9 550 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 CLEC3AO75596 197 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 ZIC2O95409 532 aaPredicted RBP18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 NDUFV2P19404 249 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 AHRP35869 848 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 GCGRP47871 477 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 CDONQ4KMG0 1287 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 NIPAL3Q6P499 406 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 PLBD1Q6P4A8 553 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 LYPD4Q6UWN0 246 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 TRMT10AQ8TBZ6 339 aaKnown RBP18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 LRRC20Q8TCA0 184 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 AHCYL2Q96HN2 611 aaKnown RBP18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 UBQLN3Q9H347 655 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 MED20Q9H944 212 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 PRKAG2Q9UGJ0 569 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 WNT6Q9Y6F9 365 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 RNF215Q9Y6U7 377 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 MDC1Q14676 2089 aaKnown RBP18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 A0A1W2PR48 441 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 OR5K3A6NET4 321 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 SLC9B1P1A6NJY1 282 aa18.26■□□□□ 0.51
PDLIM3-212ENST00000620787 SCO1O75880 301 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms