RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 ACOT7O00154 380 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 SFTA3P0C7M3 94 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 KDELR2P33947 212 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 SCNN1GP51170 649 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 NHLRC1Q6VVB1 395 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 VSIG10LQ86VR7 867 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 MCATQ8IVS2 390 aaKnown RBP4.77□□□□□ -1.65
VPS13D-214ENST00000620676 GPRC5AQ8NFJ5 357 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 LGALS14Q8TCE9 139 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 MS4A3Q96HJ5 214 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 XYLT2Q9H1B5 865 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 MFSD1Q9H3U5 465 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 FZD3Q9NPG1 666 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 KCNIP3Q9Y2W7 256 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 IQGAP3Q86VI3 1631 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 XKRYO14609 159 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 LRRTM2O43300 516 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 YIF1AO95070 293 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 LALBAP00709 142 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 BEND4Q6ZU67 534 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 OR5M3Q8NGP4 307 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 SCGB1C1Q8TD33 95 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 MAGIXQ9H6Y5 334 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF275Q9NSD4 429 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 FAAHO00519 579 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 DPYSL4O14531 572 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 MTNR1AP48039 350 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 SLC26A5P58743 744 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 EEF1A1P68104 462 aaKnown RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 EEF1A2Q05639 463 aaKnown RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 EEF1A1P5Q5VTE0 462 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 GLB1LQ6UWU2 654 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 LINC00518Q8N0U6 118 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 NPWQ8N729 165 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 CHST11Q9NPF2 352 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ATP5A1P25705 553 aaKnown RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 CD68P34810 354 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 BDH1Q02338 343 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 INSL4Q14641 139 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 RAET1GQ6H3X3 334 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 FCRLAQ7L513 359 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ISCA2Q86U28 154 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 GLB1L2Q8IW92 636 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ARHGAP12Q8IWW6 846 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 CMTM7Q96FZ5 175 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 INTS14Q96SY0 518 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 SYT17Q9BSW7 474 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 EIF3GO75821 320 aaKnown RBP eCLIP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 HMGN1P05114 100 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 PRPS2P11908 318 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ADH6P28332 368 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 SOX18P35713 384 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 RPS27AP62979 156 aaKnown RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 UBA52P62987 128 aaKnown RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 TCEAL1Q15170 157 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ACSM3Q53FZ2 586 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF584Q8IVC4 421 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ISOC2Q96AB3 205 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 LENG9Q96B70 501 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 OR14A2Q96R54 314 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 LOC285095A0A1B0GVY8 99 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 CLDN24A6NM45 220 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 SLC16A6O15403 523 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 STK17BO94768 372 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 NFYBP25208 207 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 MRPS10P82664 201 aaKnown RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 SYT6Q5T7P8 510 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 RBMS3Q6XE24 437 aaKnown RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 TMEM200AQ86VY9 491 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 KCNRGQ8N5I3 272 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 OR8D1Q8WZ84 308 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 GPR39O43194 453 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 GABRR2P28476 465 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ARFRP1Q13795 201 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 FAM83HQ6ZRV2 1179 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 RANBP3LQ86VV4 465 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 NT5DC2Q9H857 520 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 TMX2Q9Y320 296 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 H3BQ06 376 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 YKT6O15498 198 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ITGA10O75578 1167 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 HOXB5P09067 269 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 RNH1P13489 461 aaKnown RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 RPS24P62847 133 aaKnown RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 PARP15Q460N3 678 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 PSRC1Q6PGN9 363 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 TMEM107Q6UX40 140 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 OR52E2Q8NGJ4 325 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 RNF170Q96K19 258 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 TMEM134Q9H6X4 195 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 PREX2Q70Z35 1606 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 NRCAMQ92823 1304 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 IL1BP01584 269 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 SPP1P10451 314 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 POU3F2P20265 443 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ASCL1P50553 236 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 FABP6P51161 128 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 GPR50Q13585 617 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 TAF1AQ15573 450 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ARNTL2Q8WYA1 636 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms