RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 MVB12AQ96EY5 273 aa20■□□□□ 0.79
SGMS1-210ENST00000619438 ZNF354BQ96LW1 612 aa20■□□□□ 0.79
SGMS1-210ENST00000619438 SIGLEC11Q96RL6 698 aa20■□□□□ 0.79
SGMS1-210ENST00000619438 MACROD1Q9BQ69 325 aa20■□□□□ 0.79
SGMS1-210ENST00000619438 NAA50Q9GZZ1 169 aaKnown RBP20■□□□□ 0.79
SGMS1-210ENST00000619438 BCL2L10Q9HD36 194 aa20■□□□□ 0.79
SGMS1-210ENST00000619438 GCN1Q92616 2671 aaKnown RBP19.99■□□□□ 0.79
SGMS1-210ENST00000619438 ZNF99A8MXY4 864 aaPredicted RBP19.99■□□□□ 0.79
SGMS1-210ENST00000619438 J3KTA2 159 aa19.99■□□□□ 0.79
SGMS1-210ENST00000619438 P2RX6O15547 441 aa19.99■□□□□ 0.79
SGMS1-210ENST00000619438 SERPINB7O75635 380 aa19.99■□□□□ 0.79
SGMS1-210ENST00000619438 CCNB2O95067 398 aa19.99■□□□□ 0.79
SGMS1-210ENST00000619438 AIFM1O95831 613 aa19.99■□□□□ 0.79
SGMS1-210ENST00000619438 ONECUT2O95948 504 aa19.99■□□□□ 0.79
SGMS1-210ENST00000619438 CCNA2P20248 432 aa19.99■□□□□ 0.79
SGMS1-210ENST00000619438 FBLP22087 321 aaKnown RBP19.99■□□□□ 0.79
SGMS1-210ENST00000619438 GPC1P35052 558 aa19.99■□□□□ 0.79
SGMS1-210ENST00000619438 NCBP2P52298 156 aaKnown RBP eCLIP19.99■□□□□ 0.792e-10■■■■□ 21.3
SGMS1-210ENST00000619438 FOXL2P58012 376 aa19.99■□□□□ 0.79
SGMS1-210ENST00000619438 EMX1Q04741 257 aaPredicted RBP19.99■□□□□ 0.79
SGMS1-210ENST00000619438 C19orf57Q0VDD7 668 aa19.99■□□□□ 0.79
SGMS1-210ENST00000619438 RPS26P11Q5JNZ5 115 aaPredicted RBP19.99■□□□□ 0.79
SGMS1-210ENST00000619438 COLEC12Q5KU26 742 aa19.99■□□□□ 0.79
SGMS1-210ENST00000619438 PRAMEF8Q5VWM4 474 aa19.99■□□□□ 0.79
SGMS1-210ENST00000619438 PRAMEF7Q5VXH5 474 aa19.99■□□□□ 0.79
SGMS1-210ENST00000619438 ASPGQ86U10 573 aa19.99■□□□□ 0.79
SGMS1-210ENST00000619438 SVOPQ8N4V2 548 aa19.99■□□□□ 0.79
SGMS1-210ENST00000619438 SUN3Q8TAQ9 357 aa19.99■□□□□ 0.79
SGMS1-210ENST00000619438 PROX1Q92786 737 aa19.99■□□□□ 0.79
SGMS1-210ENST00000619438 RAB8BQ92930 207 aa19.99■□□□□ 0.79
SGMS1-210ENST00000619438 OR51I1Q9H343 314 aa19.99■□□□□ 0.79
SGMS1-210ENST00000619438 ZNF556Q9HAH1 456 aa19.99■□□□□ 0.79
SGMS1-210ENST00000619438 PCDHGA10Q9Y5H3 936 aa19.99■□□□□ 0.79
SGMS1-210ENST00000619438 GPC6Q9Y625 555 aaPredicted RBP19.99■□□□□ 0.79
SGMS1-210ENST00000619438 A0A0A6YYC8 382 aaPredicted RBP19.98■□□□□ 0.79
SGMS1-210ENST00000619438 I3L1I5 382 aaPredicted RBP19.98■□□□□ 0.79
SGMS1-210ENST00000619438 PEX12O00623 359 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 PROM1O43490 865 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 CNOT3O75175 753 aaKnown RBP19.98■□□□□ 0.79
SGMS1-210ENST00000619438 SLC35G6P0C7Q6 338 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 PPP2R1BP30154 601 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 AVPR1BP47901 424 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 PIGFQ07326 219 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 RGS1Q08116 209 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 FAM53BQ14153 422 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 GNA13Q14344 377 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 SHISA6Q6ZSJ9 500 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 PRSS48Q7RTY5 328 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 VN1R4Q7Z5H5 301 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 DEPDC4Q8N2C3 294 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 OR56A1Q8NGH5 318 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 BBS10Q8TAM1 723 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 ADAMTS17Q8TE56 1095 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 PHF10Q8WUB8 498 aaKnown RBP19.98■□□□□ 0.79
SGMS1-210ENST00000619438 APH1BQ8WW43 257 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 TM4SF19Q96DZ7 209 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 CNRIP1Q96F85 164 aaPredicted RBP19.98■□□□□ 0.79
SGMS1-210ENST00000619438 IP6K3Q96PC2 410 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 TREX2Q9BQ50 279 aaPredicted RBP19.98■□□□□ 0.79
SGMS1-210ENST00000619438 ROGDIQ9GZN7 287 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 SLC25A18Q9H1K4 315 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 WDR54Q9H977 334 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 PRDM9Q9NQV7 894 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 ZCCHC3Q9NUD5 404 aaKnown RBP19.98■□□□□ 0.79
SGMS1-210ENST00000619438 RLIMQ9NVW2 624 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 ERVK-18Q9QC07 812 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 NXT1Q9UKK6 140 aaKnown RBP19.98■□□□□ 0.79
SGMS1-210ENST00000619438 ENTPD4Q9Y227 616 aa19.98■□□□□ 0.79
SGMS1-210ENST00000619438 PRAMEF27A3QJZ7 478 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 MKRN2OSH3BPM6 223 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 PGRMC2O15173 223 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 CSNK2A2P19784 350 aaPredicted RBP19.97■□□□□ 0.79
SGMS1-210ENST00000619438 KRT20P35900 424 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 CCL11P51671 97 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 GP2P55259 537 aaKnown RBP19.97■□□□□ 0.79
SGMS1-210ENST00000619438 NFATC3Q12968 1075 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 CYP27C1Q4G0S4 372 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 ZNF770Q6IQ21 691 aaPredicted RBP19.97■□□□□ 0.79
SGMS1-210ENST00000619438 COX15Q7KZN9 410 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 KRT73Q86Y46 540 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 ANKRD13BQ86YJ7 626 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 OR52J3Q8NH60 311 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 RHOXF1Q8NHV9 184 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 ABHD17AQ96GS6 310 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 ALPK1Q96QP1 1244 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 MAPKAP1Q9BPZ7 522 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 SPATA5L1Q9BVQ7 753 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 SLC26A1Q9H2B4 701 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 TRPC4Q9UBN4 977 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 CTSFQ9UBX1 484 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 TUBD1Q9UJT1 453 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 ACAD8Q9UKU7 415 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 PSME2Q9UL46 239 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 RNF6Q9Y252 685 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 FASNP49327 2511 aaKnown RBP19.97■□□□□ 0.79
SGMS1-210ENST00000619438 PCDH17O14917 1159 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 RGS10O43665 173 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 SLC28A2O43868 658 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 FAM20BO75063 409 aa19.97■□□□□ 0.79
SGMS1-210ENST00000619438 OXSR1O95747 527 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms