RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 C16orf97H3BN30 126 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 H3BQF6 201 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 SMPD2O60906 423 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 AQP8O94778 261 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 PROCP04070 461 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 IFI6P09912 130 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 RPS3AP61247 264 aaKnown RBP18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 PRR5P85299 388 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 C17orf67Q0P5P2 114 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 HSPB3Q12988 150 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 FGFBP1Q14512 234 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 KIAA0040Q15053 153 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 TMEM44Q2T9K0 475 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 ANKRD26P1Q6NSI1 321 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 CLEC9AQ6UXN8 241 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 C22orf34Q6ZV56 151 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 GGNQ86UU5 652 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 P3H2Q8IVL5 708 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 LRRC75A-AS1Q8N1F1 130 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 PIGTQ969N2 578 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 GFM2Q969S9 779 aaKnown RBP18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 ZC3HAV1LQ96H79 300 aaKnown RBP18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 MARK4Q96L34 752 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 HS3ST6Q96QI5 342 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 ZNF395Q9H8N7 513 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 C3orf14Q9HBI5 128 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 PROCRQ9UNN8 238 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 VDAC3Q9Y277 283 aa18.67■□□□□ 0.58
TRAPPC3-208ENST00000616074 DSCAMO60469 2012 aa18.66■□□□□ 0.58
TRAPPC3-208ENST00000616074 ARHGEF9O43307 516 aa18.66■□□□□ 0.58
TRAPPC3-208ENST00000616074 KCNH1O95259 989 aa18.66■□□□□ 0.58
TRAPPC3-208ENST00000616074 NAA20P61599 178 aa18.66■□□□□ 0.58
TRAPPC3-208ENST00000616074 OCRLQ01968 901 aa18.66■□□□□ 0.58
TRAPPC3-208ENST00000616074 ACKR1Q16570 336 aa18.66■□□□□ 0.58
TRAPPC3-208ENST00000616074 SGCBQ16585 318 aa18.66■□□□□ 0.58
TRAPPC3-208ENST00000616074 SH2D5Q6ZV89 423 aa18.66■□□□□ 0.58
TRAPPC3-208ENST00000616074 FAM214BQ7L5A3 538 aa18.66■□□□□ 0.58
TRAPPC3-208ENST00000616074 GALNT10Q86SR1 603 aa18.66■□□□□ 0.58
TRAPPC3-208ENST00000616074 GPR151Q8TDV0 419 aa18.66■□□□□ 0.58
TRAPPC3-208ENST00000616074 CIDECQ96AQ7 238 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC3-208ENST00000616074 PTGDR2Q9Y5Y4 395 aa18.66■□□□□ 0.58
TRAPPC3-208ENST00000616074 TTC36A6NLP5 189 aa18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 EIF1AYO14602 144 aaKnown RBP18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 PDPK1O15530 556 aa18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 PLIN3O60664 434 aa18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 SEC22BO75396 215 aa18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 NKX2-2O95096 273 aa18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 UROSP10746 265 aa18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 PRPS2P11908 318 aa18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 FCGR2AP12318 317 aa18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 PRPH2P23942 346 aa18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 LOXP28300 417 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 GPC1P35052 558 aa18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 MAP3K8P41279 467 aa18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 SLC6A8P48029 635 aa18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 DNAJB13P59910 316 aa18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 ZNF385BQ569K4 471 aa18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 CFAP157Q5JU67 520 aa18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 ANKRD34AQ69YU3 496 aa18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 CLEC6AQ6EIG7 209 aa18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 PPP4R4Q6NUP7 873 aa18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 EXOC3L1Q86VI1 746 aa18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 GSPT2Q8IYD1 628 aaKnown RBP18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 SLC9A6Q92581 669 aa18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 HOXB13Q92826 284 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 CCL19Q99731 98 aa18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 C12orf65Q9H3J6 166 aaKnown RBP18.65■□□□□ 0.58
TRAPPC3-208ENST00000616074 HEXAP06865 529 aa18.64■□□□□ 0.57
TRAPPC3-208ENST00000616074 FPR1P21462 350 aa18.64■□□□□ 0.57
TRAPPC3-208ENST00000616074 EIF1AXP47813 144 aaKnown RBP18.64■□□□□ 0.57
TRAPPC3-208ENST00000616074 EXOC3L2Q2M3D2 409 aa18.64■□□□□ 0.57
TRAPPC3-208ENST00000616074 CCDC153Q494R4 210 aa18.64■□□□□ 0.57
TRAPPC3-208ENST00000616074 CIARTQ8N365 385 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC3-208ENST00000616074 FBXO30Q8TB52 745 aa18.64■□□□□ 0.57
TRAPPC3-208ENST00000616074 METTL2AQ96IZ6 378 aaKnown RBP18.64■□□□□ 0.57
TRAPPC3-208ENST00000616074 COX4I2Q96KJ9 171 aa18.64■□□□□ 0.57
TRAPPC3-208ENST00000616074 NPAS1Q99742 590 aa18.64■□□□□ 0.57
TRAPPC3-208ENST00000616074 KLHL4Q9C0H6 718 aa18.64■□□□□ 0.57
TRAPPC3-208ENST00000616074 LRTM1Q9HBL6 345 aa18.64■□□□□ 0.57
TRAPPC3-208ENST00000616074 OXSMQ9NWU1 459 aa18.64■□□□□ 0.57
TRAPPC3-208ENST00000616074 CLEC4AQ9UMR7 237 aa18.64■□□□□ 0.57
TRAPPC3-208ENST00000616074 FN1P02751 2386 aaKnown RBP18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 ALG1L2C9J202 215 aa18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 NPIPB8E9PQR5 432 aa18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 OXSR1O95747 527 aaPredicted RBP18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 ZNF17P17021 662 aa18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 TBXA2RP21731 343 aa18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 PRKAG1P54619 331 aa18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 VPS26BQ4G0F5 336 aa18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 CNPY4Q8N129 248 aa18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 CEP112Q8N8E3 955 aa18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 CDRT4Q8N9R6 151 aa18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 GATSQ8NAP1 163 aa18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 NUP43Q8NFH3 380 aa18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 OR2T11Q8NH01 316 aa18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 OR4C3Q8NH37 302 aa18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 ARSGQ96EG1 525 aa18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 GIMAP5Q96F15 307 aa18.63■□□□□ 0.57
TRAPPC3-208ENST00000616074 PERPQ96FX8 193 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms