RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 RHCGQ9UBD6 479 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 KNL1Q8NG31 2342 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 DVL2O14641 736 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 CRABP1P29762 137 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 HTR5AP47898 357 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 PTCHD3Q3KNS1 767 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 OR52E8Q6IFG1 317 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 SPNS3Q6ZMD2 512 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 ABHD11Q8NFV4 315 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 ZNF461Q8TAF7 563 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 ULBP2Q9BZM5 246 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 PPA2Q9H2U2 334 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 HES4Q9HCC6 221 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 APMAPQ9HDC9 416 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 SLC7A8Q9UHI5 535 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 EXOSC1Q9Y3B2 195 aaKnown RBP11.98□□□□□ -0.49
TCF4-248ENST00000616053 ZNF99A8MXY4 864 aaPredicted RBP11.98□□□□□ -0.49
TCF4-248ENST00000616053 GPR137BO60478 399 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 TPSB2P20231 275 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 HTR2BP41595 481 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 TPSAB1Q15661 275 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 REEP3Q6NUK4 255 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 ROPN1LQ96C74 230 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 B3GAT1Q9P2W7 334 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 RAB3AP20336 220 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 S100A4P26447 101 aaKnown RBP11.98□□□□□ -0.49
TCF4-248ENST00000616053 TRMT2AQ8IZ69 625 aaKnown RBP11.98□□□□□ -0.49
TCF4-248ENST00000616053 SLC35C1Q96A29 364 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 NICN1Q9BSH3 213 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 KATNB1Q9BVA0 655 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 AGXT2Q9BYV1 514 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 KCMF1Q9P0J7 381 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 TOR1BO14657 336 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 AK1P00568 194 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 CTRB1P17538 263 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 PPT1P50897 306 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 MC2RQ01718 297 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 MBTPS1Q14703 1052 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 MICAQ29983 383 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 ARL13AQ5H913 290 aaPredicted RBP11.98□□□□□ -0.49
TCF4-248ENST00000616053 CTRB2Q6GPI1 263 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 OR1M1Q8NGA1 313 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 ZNF764Q96H86 408 aaPredicted RBP11.98□□□□□ -0.49
TCF4-248ENST00000616053 SLC6A17Q9H1V8 727 aa11.98□□□□□ -0.49
TCF4-248ENST00000616053 FEZF1A0PJY2 475 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 SUSD5O60279 629 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 UQCRC2P22695 453 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 DAOAP59103 153 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 ARHGAP11AQ6P4F7 1023 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 GALNT15Q8N3T1 639 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 SLC35G3Q8N808 338 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 M1APQ8TC57 530 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 MAF1Q9H063 256 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 ZNF541Q9H0D2 1346 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 FAM163BP0C2L3 166 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 ENPP1P22413 925 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 CRHR1P34998 444 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 ZNF763Q0D2J5 394 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 IL17AQ16552 155 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 DEFB109BQ30KR1 87 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 DBX2Q6ZNG2 339 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 SULF2Q8IWU5 870 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 SLC41A3Q96GZ6 507 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 AKR1E2Q96JD6 320 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 COPS3Q9UNS2 423 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 REREQ9P2R6 1566 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 MYH13Q9UKX3 1938 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 PMS2P1A4D2B8 440 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 AREGP15514 252 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 SSR4P51571 173 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 SLC36A2Q495M3 483 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 FIGNQ5HY92 759 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 C1orf226A1L170 272 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 SORBS2O94875 1100 aaKnown RBP11.97□□□□□ -0.49
TCF4-248ENST00000616053 MBP02144 154 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 HOXD8P13378 290 aaPredicted RBP11.97□□□□□ -0.49
TCF4-248ENST00000616053 CD34P28906 385 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 ZMAT1Q5H9K5 638 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 B3GLCTQ6Y288 498 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 NPAS3Q8IXF0 933 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 JOSD2Q8TAC2 188 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 CA5BP1Q8WTZ4 195 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 PKP2Q99959 881 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 ELOVL3Q9HB03 270 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 SMOXQ9NWM0 555 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 OR7A17O14581 309 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 TK1P04183 234 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 BPGMP07738 259 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 ETV3P41162 512 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 SLC11A1P49279 550 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 ERVK-8P63133 956 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 CEACAM19Q7Z692 300 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 PYROXD2Q8N2H3 581 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 SCN1AP35498 2009 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 DLGAP1O14490 977 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 ITGB8P26012 769 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 TBC1D28Q2M2D7 210 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 TSGA10IPQ3SY00 556 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 MFSD12Q6NUT3 480 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 GPR83Q9NYM4 423 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms