RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 FUZQ9BT04 418 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.35□□□□□ -0.434e-8■■□□□ 12.3
MSH6-214ENST00000616033 OR2AG1Q9H205 316 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 ZNF69Q9UC07 566 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 ASF1AQ9Y294 204 aa12.35□□□□□ -0.43
MSH6-214ENST00000616033 QSOX1O00391 747 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 INPPL1O15357 1258 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 FZD7O75084 574 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 ANKRD34CP0C6C1 535 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 VEGFCP49767 419 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 C3orf38Q5JPI3 329 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 PLEKHS1Q5SXH7 462 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 FAM71E1Q6IPT2 247 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 TMCO2Q7Z6W1 182 aaPredicted RBP12.34□□□□□ -0.43
MSH6-214ENST00000616033 NANPQ8TBE9 248 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 TTYH1Q9H313 450 aaPredicted RBP12.34□□□□□ -0.43
MSH6-214ENST00000616033 PCDHB16Q9NRJ7 776 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 HPF1Q9NWY4 346 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 TRDV1A0A1B0GX56 115 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 DAPL1A0PJW8 107 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 LINC00862A6NCI5 91 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 H7BY64 318 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 PSMD9O00233 223 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 AHCYP23526 432 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 IRS1P35568 1242 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 CLDN12P56749 244 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 RAB40BQ12829 278 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 MELKQ14680 651 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 VRK2Q86Y07 508 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 NKAIN4Q8IVV8 208 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 NRMQ8IXM6 262 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 CCDC116Q8IYX3 515 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 SIRT6Q8N6T7 355 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 ANKRD53Q8N9V6 530 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 KIAA1143Q96AT1 154 aaPredicted RBP12.34□□□□□ -0.43
MSH6-214ENST00000616033 TMEM169Q96HH4 297 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 SAMD8Q96LT4 415 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 PRAP1Q96NZ9 151 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 TMEM175Q9BSA9 504 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 CCDC86Q9H6F5 360 aaKnown RBP12.34□□□□□ -0.43
MSH6-214ENST00000616033 HEXA-AS1Q9H8Q6 139 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 MLXQ9UH92 298 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 AK6Q9Y3D8 172 aaKnown RBP12.34□□□□□ -0.43
MSH6-214ENST00000616033 A0A1W2PS29 197 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 L7N2F9 121 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 ARPC5O15511 151 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 TRIM3O75382 744 aaPredicted RBP12.34□□□□□ -0.43
MSH6-214ENST00000616033 OR5F1O95221 314 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 C1GALT1C1LP0DN25 315 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 PSMA3P25788 255 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 KCNJ5P48544 419 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 E2F1Q01094 437 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 TMEM115Q12893 351 aaPredicted RBP12.34□□□□□ -0.43
MSH6-214ENST00000616033 TMEM88Q6PEY1 159 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 RPLP0P6Q8NHW5 317 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 PDXPQ96GD0 296 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 BBS4Q96RK4 519 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 GSX2Q9BZM3 304 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 MARCH5Q9NX47 278 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 TAC3Q9UHF0 121 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 KCNE3Q9Y6H6 103 aa12.34□□□□□ -0.43
MSH6-214ENST00000616033 PRAMEF27A3QJZ7 478 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 PLA1AQ53H76 456 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 TCTE1Q5JU00 501 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 GPR139Q6DWJ6 353 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 LIX1LQ8IVB5 337 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 TMEM99Q8N816 258 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 SMPDL3AQ92484 453 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 SLC35G5Q96KT7 338 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 ZNF416Q9BWM5 594 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 KLF16Q9BXK1 252 aaPredicted RBP12.33□□□□□ -0.44
MSH6-214ENST00000616033 BRF2Q9HAW0 419 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 SDHAF2Q9NX18 166 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 COPZ2Q9P299 210 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 MGAT4CQ9UBM8 478 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 FBXL2Q9UKC9 423 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 EXOSC1Q9Y3B2 195 aaKnown RBP12.33□□□□□ -0.44
MSH6-214ENST00000616033 FXYD6-FXYD2A0A087WZ82 144 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 OR5K3A6NET4 321 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 TFP02787 698 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 WNT1P04628 370 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 HMGA1P17096 107 aaKnown RBP12.33□□□□□ -0.44
MSH6-214ENST00000616033 PYCR1P32322 319 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 MAGEB1P43366 347 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 TAP2Q03519 686 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 ARSIQ5FYB1 569 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 ATRAIDQ6UW56 229 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 RNF165Q6ZSG1 346 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 Q6ZTK2 550 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 STPG2Q8N412 459 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 RELTQ969Z4 430 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 ERMAPQ96PL5 475 aaPredicted RBP12.33□□□□□ -0.44
MSH6-214ENST00000616033 KCNJ15Q99712 375 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 GAL3ST1Q99999 423 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 GINS4Q9BRT9 223 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 FXYD6Q9H0Q3 95 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 GPR55Q9Y2T6 319 aaPredicted RBP12.33□□□□□ -0.44
MSH6-214ENST00000616033 OR51B4Q9Y5P0 310 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 RPS10-NUDT3A0A1W2PQS6 291 aa12.33□□□□□ -0.44
MSH6-214ENST00000616033 NEDD8-MDP1E9PL57 170 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms