RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 MVDP53602 400 aa5.17□□□□□ -1.58
CPNE3-208ENST00000614678 PPP2R2AP63151 447 aa5.17□□□□□ -1.58
CPNE3-208ENST00000614678 GPR68Q15743 365 aa5.17□□□□□ -1.58
CPNE3-208ENST00000614678 VPS26BQ4G0F5 336 aa5.17□□□□□ -1.58
CPNE3-208ENST00000614678 EXOSC6Q5RKV6 272 aaKnown RBP5.17□□□□□ -1.58
CPNE3-208ENST00000614678 C6orf163Q5TEZ5 329 aa5.17□□□□□ -1.58
CPNE3-208ENST00000614678 ARHGAP11AQ6P4F7 1023 aa5.17□□□□□ -1.58
CPNE3-208ENST00000614678 POMZP3Q6PJE2 187 aa5.17□□□□□ -1.58
CPNE3-208ENST00000614678 EPGNQ6UW88 154 aa5.17□□□□□ -1.58
CPNE3-208ENST00000614678 Q6ZPB1 254 aaPredicted RBP5.17□□□□□ -1.58
CPNE3-208ENST00000614678 RNF165Q6ZSG1 346 aa5.17□□□□□ -1.58
CPNE3-208ENST00000614678 SLC22A16Q86VW1 577 aa5.17□□□□□ -1.58
CPNE3-208ENST00000614678 OR10Q1Q8NGQ4 319 aa5.17□□□□□ -1.58
CPNE3-208ENST00000614678 NEIL3Q8TAT5 605 aa5.17□□□□□ -1.58
CPNE3-208ENST00000614678 FAM76AQ8TAV0 307 aa5.17□□□□□ -1.58
CPNE3-208ENST00000614678 ZBED6CLQ96FA7 236 aaPredicted RBP5.17□□□□□ -1.58
CPNE3-208ENST00000614678 TTYH2Q9BSA4 534 aa5.17□□□□□ -1.58
CPNE3-208ENST00000614678 LMF2Q9BU23 707 aaKnown RBP5.17□□□□□ -1.58
CPNE3-208ENST00000614678 PRR14Q9BWN1 585 aa5.17□□□□□ -1.58
CPNE3-208ENST00000614678 CCDC167Q9P0B6 97 aa5.17□□□□□ -1.58
CPNE3-208ENST00000614678 USP22Q9UPT9 525 aa5.17□□□□□ -1.58
CPNE3-208ENST00000614678 A0A087WV62 115 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 RNF103-CHMP3A0A140T963 221 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 OR6C70A6NIJ9 312 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 H3BML4 177 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 NKX2-2O95096 273 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 GLI4P10075 376 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 ESRRAP11474 423 aaPredicted RBP5.16□□□□□ -1.58
CPNE3-208ENST00000614678 CAPN3P20807 821 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 EDNRAP25101 427 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.16□□□□□ -1.58
CPNE3-208ENST00000614678 PACS2Q86VP3 889 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 MSRB3Q8IXL7 192 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 C9orf106Q8NAJ2 232 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 ATP6V1C2Q8NEY4 427 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 OR14L1PQ8NHC6 308 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 XAGE5Q8WWM1 108 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 ZNF597Q96LX8 424 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 SLC39A3Q9BRY0 314 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 OR51I1Q9H343 314 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 SLC52A3Q9NQ40 469 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 INTS9Q9NV88 658 aaKnown RBP5.16□□□□□ -1.58
CPNE3-208ENST00000614678 TAS2R10Q9NYW0 307 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 PRODH2Q9UF12 536 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 CLEC4AQ9UMR7 237 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 CAMK2AQ9UQM7 478 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 EIF3LQ9Y262 564 aaKnown RBP5.16□□□□□ -1.58
CPNE3-208ENST00000614678 CARD8Q9Y2G2 431 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 TMED5Q9Y3A6 229 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 ANKRD17O75179 2603 aaKnown RBP5.16□□□□□ -1.58
CPNE3-208ENST00000614678 SNPHO15079 494 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 EMC8O43402 210 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 TNFRSF21O75509 655 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 PGRP06401 933 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 PRPS1L1P21108 318 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 HPCAL1P37235 193 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 PRIM2P49643 509 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 GFRA1P56159 465 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 HOXC5Q00444 222 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 INAQ16352 499 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 SPDYE7PQ495Y7 208 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 CYP27C1Q4G0S4 372 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 PDZK1Q5T2W1 519 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 SP5Q6BEB4 398 aaPredicted RBP5.16□□□□□ -1.58
CPNE3-208ENST00000614678 ANKFN1Q8N957 763 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 FAM98AQ8NCA5 519 aaKnown RBP5.16□□□□□ -1.58
CPNE3-208ENST00000614678 HOXB13Q92826 284 aaPredicted RBP5.16□□□□□ -1.58
CPNE3-208ENST00000614678 HSPBAP1Q96EW2 488 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 WDYHV1Q96HA8 205 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 TUBA1CQ9BQE3 449 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 FGFR1OP2Q9NVK5 253 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 SLC25A37Q9NYZ2 338 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 FRS3O43559 492 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 CYP7B1O75881 506 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 IL33O95760 270 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 ETFAP13804 333 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 BMP5P22003 454 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 HTR1EP28566 365 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 SERPINB5P36952 375 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 SLC6A8P48029 635 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 ZNF117Q03924 483 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 SELPLGQ14242 412 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 HYAL4Q2M3T9 481 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 KRTCAP3Q53RY4 240 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 VASNQ6EMK4 673 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 MAMDC2Q7Z304 686 aaPredicted RBP5.16□□□□□ -1.58
CPNE3-208ENST00000614678 COX18Q8N8Q8 333 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 RELL2Q8NC24 303 aaPredicted RBP5.16□□□□□ -1.58
CPNE3-208ENST00000614678 C17orf47Q8NEP4 570 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 OR2M3Q8NG83 312 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 POC1BQ8TC44 478 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 RNF138Q8WVD3 245 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 CKAP2Q8WWK9 683 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 ZNF775Q96BV0 537 aaPredicted RBP5.16□□□□□ -1.58
CPNE3-208ENST00000614678 MS4A4EQ96PG1 132 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 OR52E6Q96RD3 313 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 TRIB1Q96RU8 372 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 CNIH4Q9P003 139 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 ITPR3Q14573 2671 aa5.16□□□□□ -1.58
CPNE3-208ENST00000614678 HMGN4O00479 90 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms