RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 CLEC4AQ9UMR7 237 aa16.04■□□□□ 0.16
SMN2-213ENST00000614240 VDAC3Q9Y277 283 aa16.04■□□□□ 0.16
SMN2-213ENST00000614240 ARID1AO14497 2285 aa16.03■□□□□ 0.16
SMN2-213ENST00000614240 SERTM1A2A2V5 107 aa16.03■□□□□ 0.16
SMN2-213ENST00000614240 TTC36A6NLP5 189 aa16.03■□□□□ 0.16
SMN2-213ENST00000614240 SHISA8B8ZZ34 492 aa16.03■□□□□ 0.16
SMN2-213ENST00000614240 SYNGR4O95473 234 aa16.03■□□□□ 0.16
SMN2-213ENST00000614240 GPC1P35052 558 aa16.03■□□□□ 0.16
SMN2-213ENST00000614240 PTH2RP49190 550 aa16.03■□□□□ 0.16
SMN2-213ENST00000614240 OCRLQ01968 901 aa16.03■□□□□ 0.16
SMN2-213ENST00000614240 C22orf34Q6ZV56 151 aa16.03■□□□□ 0.16
SMN2-213ENST00000614240 WDR75Q8IWA0 830 aaKnown RBP16.03■□□□□ 0.16
SMN2-213ENST00000614240 LRRN4CLQ8ND94 238 aa16.03■□□□□ 0.16
SMN2-213ENST00000614240 MNS1Q8NEH6 495 aa16.03■□□□□ 0.16
SMN2-213ENST00000614240 TMEM171Q8WVE6 324 aa16.03■□□□□ 0.16
SMN2-213ENST00000614240 MARK4Q96L34 752 aa16.03■□□□□ 0.16
SMN2-213ENST00000614240 LMF2Q9BU23 707 aaKnown RBP16.03■□□□□ 0.16
SMN2-213ENST00000614240 GSX2Q9BZM3 304 aa16.03■□□□□ 0.16
SMN2-213ENST00000614240 MCTS1Q9ULC4 181 aaKnown RBP16.03■□□□□ 0.16
SMN2-213ENST00000614240 WBP11Q9Y2W2 641 aaKnown RBP16.03■□□□□ 0.16
SMN2-213ENST00000614240 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.02■□□□□ 0.16
SMN2-213ENST00000614240 GXYLT2A0PJZ3 443 aa16.02■□□□□ 0.16
SMN2-213ENST00000614240 CNOT4O95628 575 aaKnown RBP16.02■□□□□ 0.16
SMN2-213ENST00000614240 GSTA1P08263 222 aa16.02■□□□□ 0.16
SMN2-213ENST00000614240 SLC6A8P48029 635 aa16.02■□□□□ 0.16
SMN2-213ENST00000614240 FOXA1P55317 472 aa16.02■□□□□ 0.16
SMN2-213ENST00000614240 PRR5P85299 388 aa16.02■□□□□ 0.16
SMN2-213ENST00000614240 HSPB3Q12988 150 aa16.02■□□□□ 0.16
SMN2-213ENST00000614240 GUSBP1Q15486 140 aa16.02■□□□□ 0.16
SMN2-213ENST00000614240 GRAMD1BQ3KR37 738 aa16.02■□□□□ 0.16
SMN2-213ENST00000614240 VPS26BQ4G0F5 336 aa16.02■□□□□ 0.16
SMN2-213ENST00000614240 WFDC8Q8IUA0 241 aa16.02■□□□□ 0.16
SMN2-213ENST00000614240 NOA1Q8NC60 698 aaKnown RBP16.02■□□□□ 0.16
SMN2-213ENST00000614240 OR6K3Q8NGY3 331 aa16.02■□□□□ 0.16
SMN2-213ENST00000614240 PPP1R14CQ8TAE6 165 aa16.02■□□□□ 0.16
SMN2-213ENST00000614240 FAM76AQ8TAV0 307 aa16.02■□□□□ 0.16
SMN2-213ENST00000614240 SLC9A6Q92581 669 aa16.02■□□□□ 0.16
SMN2-213ENST00000614240 CCDC126Q96EE4 140 aa16.02■□□□□ 0.16
SMN2-213ENST00000614240 GMPPAQ96IJ6 420 aaPredicted RBP16.02■□□□□ 0.16
SMN2-213ENST00000614240 C16orf45Q96MC5 204 aaPredicted RBP16.02■□□□□ 0.16
SMN2-213ENST00000614240 GSTO2Q9H4Y5 243 aa16.02■□□□□ 0.16
SMN2-213ENST00000614240 HHATLQ9HCP6 504 aa16.02■□□□□ 0.16
SMN2-213ENST00000614240 RRAGDQ9NQL2 400 aaPredicted RBP16.02■□□□□ 0.16
SMN2-213ENST00000614240 PLSCR4Q9NRQ2 329 aa16.02■□□□□ 0.16
SMN2-213ENST00000614240 PAQR5Q9NXK6 330 aaPredicted RBP16.02■□□□□ 0.16
SMN2-213ENST00000614240 NSD1Q96L73 2696 aaPredicted RBP16.01■□□□□ 0.15
SMN2-213ENST00000614240 IGLV3-32A0A0A0MS00 114 aa16.01■□□□□ 0.15
SMN2-213ENST00000614240 UBFD1O14562 309 aaKnown RBP16.01■□□□□ 0.15
SMN2-213ENST00000614240 NDUFB5O43674 189 aa16.01■□□□□ 0.15
SMN2-213ENST00000614240 PSMG1O95456 288 aa16.01■□□□□ 0.15
SMN2-213ENST00000614240 OPN1LWP04000 364 aa16.01■□□□□ 0.15
SMN2-213ENST00000614240 ABHD2P08910 425 aa16.01■□□□□ 0.15
SMN2-213ENST00000614240 MYL2P10916 166 aa16.01■□□□□ 0.15
SMN2-213ENST00000614240 PRPS2P11908 318 aa16.01■□□□□ 0.15
SMN2-213ENST00000614240 ECHS1P30084 290 aa16.01■□□□□ 0.15
SMN2-213ENST00000614240 PRKAG1P54619 331 aa16.01■□□□□ 0.15
SMN2-213ENST00000614240 NR1H2P55055 460 aa16.01■□□□□ 0.15
SMN2-213ENST00000614240 GLE1Q53GS7 698 aaKnown RBP16.01■□□□□ 0.15
SMN2-213ENST00000614240 CFAP157Q5JU67 520 aa16.01■□□□□ 0.15
SMN2-213ENST00000614240 ALKBH2Q6NS38 261 aa16.01■□□□□ 0.15
SMN2-213ENST00000614240 NOXRED1Q6NXP6 359 aa16.01■□□□□ 0.15
SMN2-213ENST00000614240 ZNF704Q6ZNC4 412 aaPredicted RBP16.01■□□□□ 0.15
SMN2-213ENST00000614240 IKBIPQ70UQ0 350 aa16.01■□□□□ 0.15
SMN2-213ENST00000614240 ZNF551Q7Z340 670 aaPredicted RBP16.01■□□□□ 0.15
SMN2-213ENST00000614240 SZRD1Q7Z422 152 aa16.01■□□□□ 0.15
SMN2-213ENST00000614240 GGNQ86UU5 652 aa16.01■□□□□ 0.15
SMN2-213ENST00000614240 STK32CQ86UX6 486 aa16.01■□□□□ 0.15
SMN2-213ENST00000614240 PRIMA1Q86XR5 153 aa16.01■□□□□ 0.15
SMN2-213ENST00000614240 OR10D3Q8NH80 312 aa16.01■□□□□ 0.15
SMN2-213ENST00000614240 ACMSDQ8TDX5 336 aa16.01■□□□□ 0.15
SMN2-213ENST00000614240 PIK3R3Q92569 461 aa16.01■□□□□ 0.15
SMN2-213ENST00000614240 IQCGQ9H095 443 aaKnown RBP16.01■□□□□ 0.15
SMN2-213ENST00000614240 CXorf56Q9H5V9 222 aa16.01■□□□□ 0.15
SMN2-213ENST00000614240 DCDC2Q9UHG0 476 aa16.01■□□□□ 0.15
SMN2-213ENST00000614240 FN1P02751 2386 aaKnown RBP16.01■□□□□ 0.15
SMN2-213ENST00000614240 A0A087WZY1 265 aa16■□□□□ 0.15
SMN2-213ENST00000614240 PDPK1O15530 556 aa16■□□□□ 0.15
SMN2-213ENST00000614240 KLF4O43474 513 aa16■□□□□ 0.15
SMN2-213ENST00000614240 SEC22BO75396 215 aa16■□□□□ 0.15
SMN2-213ENST00000614240 RSL1D1O76021 490 aaKnown RBP16■□□□□ 0.15
SMN2-213ENST00000614240 IGKV1D-16P01601 117 aa16■□□□□ 0.15
SMN2-213ENST00000614240 THBDP07204 575 aa16■□□□□ 0.15
SMN2-213ENST00000614240 PYGBP11216 843 aa16■□□□□ 0.15
SMN2-213ENST00000614240 HPGDP15428 266 aa16■□□□□ 0.15
SMN2-213ENST00000614240 ZNF17P17021 662 aa16■□□□□ 0.15
SMN2-213ENST00000614240 LOXP28300 417 aaPredicted RBP16■□□□□ 0.15
SMN2-213ENST00000614240 GCAP28676 217 aa16■□□□□ 0.15
SMN2-213ENST00000614240 ZNF41P51814 821 aaPredicted RBP16■□□□□ 0.15
SMN2-213ENST00000614240 TMEM44Q2T9K0 475 aa16■□□□□ 0.15
SMN2-213ENST00000614240 PDSS1Q5T2R2 415 aa16■□□□□ 0.15
SMN2-213ENST00000614240 APOOLQ6UXV4 268 aa16■□□□□ 0.15
SMN2-213ENST00000614240 STAC2Q6ZMT1 411 aa16■□□□□ 0.15
SMN2-213ENST00000614240 BEND4Q6ZU67 534 aa16■□□□□ 0.15
SMN2-213ENST00000614240 GALNT10Q86SR1 603 aa16■□□□□ 0.15
SMN2-213ENST00000614240 EXOC3L1Q86VI1 746 aa16■□□□□ 0.15
SMN2-213ENST00000614240 CEP112Q8N8E3 955 aa16■□□□□ 0.15
SMN2-213ENST00000614240 GATSQ8NAP1 163 aa16■□□□□ 0.15
SMN2-213ENST00000614240 CEP70Q8NHQ1 597 aa16■□□□□ 0.15
SMN2-213ENST00000614240 ZFP28Q8NHY6 868 aa16■□□□□ 0.15
SMN2-213ENST00000614240 PUM2Q8TB72 1066 aaKnown RBP eCLIP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms