RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 ZNF620Q6ZNG0 422 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 GALNT12Q8IXK2 581 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 KLHL36Q8N4N3 616 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 GDPD1Q8N9F7 314 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 SIMC1Q8NDZ2 872 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 OR2T33Q8NG76 320 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 NT5CQ8TCD5 201 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 SLC22A18Q96BI1 424 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 ZNF486Q96H40 463 aaPredicted RBP16.07■□□□□ 0.16
NEK3-206ENST00000611833 TMED9Q9BVK6 235 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 SLC22A4Q9H015 551 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 KRCC1Q9NPI7 259 aaPredicted RBP16.07■□□□□ 0.16
NEK3-206ENST00000611833 MED17Q9NVC6 651 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 CSNK1G3Q9Y6M4 447 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 TRDV1A0A1B0GX56 115 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 TFECO14948 347 aaPredicted RBP16.07■□□□□ 0.16
NEK3-206ENST00000611833 CHST10O43529 356 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 TLX1P31314 330 aaPredicted RBP16.07■□□□□ 0.16
NEK3-206ENST00000611833 MADCAM1Q13477 382 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 GPR68Q15743 365 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 SDE2Q6IQ49 451 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 FBXO42Q6P3S6 717 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 BBS1Q8NFJ9 593 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 SAMD8Q96LT4 415 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 CD93Q9NPY3 652 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 COMMD3Q9UBI1 195 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 CDH10Q9Y6N8 788 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 TICRRQ7Z2Z1 1910 aa16.07■□□□□ 0.16
NEK3-206ENST00000611833 AKAP8O43823 692 aaKnown RBP16.06■□□□□ 0.16
NEK3-206ENST00000611833 SLC2A10O95528 541 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 LALBAP00709 142 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 HMGN1P05114 100 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 CSF3P09919 207 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 NDUFV2P19404 249 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 CELP19835 753 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 DUSP5Q16690 384 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 ZNF791Q3KP31 576 aaPredicted RBP16.06■□□□□ 0.16
NEK3-206ENST00000611833 ARHGAP11BQ3KRB8 267 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 CCNJQ5T5M9 372 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 ANKRD54Q6NXT1 300 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 ZNF485Q8NCK3 441 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 TOR1AIP2Q8NFQ8 470 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 FLVCR1-AS1Q8TAF5 88 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 SERINC2Q96SA4 455 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 SECISBP2Q96T21 854 aaKnown RBP16.06■□□□□ 0.16
NEK3-206ENST00000611833 HDHD5Q9BXW7 423 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 NTMQ9P121 344 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 KLF4O43474 513 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 B3GALT2O43825 422 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 DNAJB6O75190 326 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 HOXB2P14652 356 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 HTR1FP30939 366 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 ASAH1Q13510 395 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 PPP2R2DQ66LE6 453 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 CD200R1LQ6Q8B3 271 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 LSRQ86X29 649 aaPredicted RBP16.06■□□□□ 0.16
NEK3-206ENST00000611833 OR2L13Q8N349 312 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 Q8N9G6 341 aaPredicted RBP16.06■□□□□ 0.16
NEK3-206ENST00000611833 OR6F1Q8NGZ6 308 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 SLC35B4Q969S0 331 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 TSACCQ96A04 125 aaPredicted RBP16.06■□□□□ 0.16
NEK3-206ENST00000611833 CDCA3Q99618 268 aaPredicted RBP16.06■□□□□ 0.16
NEK3-206ENST00000611833 MMP28Q9H239 520 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 KCMF1Q9P0J7 381 aa16.06■□□□□ 0.16
NEK3-206ENST00000611833 EXOGQ9Y2C4 368 aaKnown RBP16.06■□□□□ 0.16
NEK3-206ENST00000611833 CCDC182A6NF36 153 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 RFXAPO00287 272 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 CDC42EP2O14613 210 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 POLR1CO15160 346 aaPredicted RBP16.05■□□□□ 0.16
NEK3-206ENST00000611833 P2RX6O15547 441 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 HLA-DPB1P04440 258 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 SSTR4P31391 388 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 ACTR1BP42025 376 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 GCGRP47871 477 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 KIAA1024LP59773 190 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 ACTR1AP61163 376 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 RUNX2Q13950 521 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 SF3B4Q15427 424 aaKnown RBP eCLIP16.05■□□□□ 0.16
NEK3-206ENST00000611833 BCL2A1Q16548 175 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 EIPR1Q53HC9 387 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 ATAD3CQ5T2N8 411 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 UTS2BQ765I0 119 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 RANBP3LQ86VV4 465 aaPredicted RBP16.05■□□□□ 0.16
NEK3-206ENST00000611833 CPOQ8IVL8 374 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 DOK4Q8TEW6 326 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 SPRYD4Q8WW59 207 aaPredicted RBP16.05■□□□□ 0.16
NEK3-206ENST00000611833 DDX28Q9NUL7 540 aaKnown RBP16.05■□□□□ 0.16
NEK3-206ENST00000611833 TMEM74BQ9NUR3 256 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 PTGFRNQ9P2B2 879 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 TNFRSF10DQ9UBN6 386 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 CBLCQ9ULV8 474 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 URADA6NGE7 173 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 CTSVO60911 334 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 PPP3R1P63098 170 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 ID2Q02363 134 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 TRMT12Q53H54 448 aaKnown RBP16.05■□□□□ 0.16
NEK3-206ENST00000611833 ZNF628Q5EBL2 1059 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 PRRT3Q5FWE3 981 aa16.05■□□□□ 0.16
NEK3-206ENST00000611833 CXXC5Q7LFL8 322 aaKnown RBP16.05■□□□□ 0.16
NEK3-206ENST00000611833 MARCH9Q86YJ5 346 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms