RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 NEUROD4Q9HD90 331 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 CHST11Q9NPF2 352 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 AIG1Q9NVV5 245 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 ABCG2Q9UNQ0 655 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 UNC79Q9P2D8 2635 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 DOCK7Q96N67 2140 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 A0A0G2JNJ9 132 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 NKX2-6A6NCS4 301 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 AHRRA9YTQ3 701 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 KDM4EB2RXH2 506 aaPredicted RBP13.09□□□□□ -0.31
TUBE1-208ENST00000604743 ANKRD28O15084 1053 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 HOXD4P09016 255 aaPredicted RBP13.09□□□□□ -0.31
TUBE1-208ENST00000604743 HPGDP15428 266 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 HK1P19367 917 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 CHRNB4P30926 498 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 ADH7P40394 386 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 CLNS1AP54105 237 aaKnown RBP13.09□□□□□ -0.31
TUBE1-208ENST00000604743 CASP9P55211 416 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 DSCR4P56555 118 aaPredicted RBP13.09□□□□□ -0.31
TUBE1-208ENST00000604743 RPS26P62854 115 aaKnown RBP13.09□□□□□ -0.31
TUBE1-208ENST00000604743 PHC1P78364 1004 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 FAM174BQ3ZCQ3 159 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 NHSL2Q5HYW2 709 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 OGFOD2Q6N063 350 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 APOOLQ6UXV4 268 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 SPATA19Q7Z5L4 167 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 LRRC34Q8IZ02 419 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 VPS37AQ8NEZ2 397 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 OR2M3Q8NG83 312 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 OR8J2Q8NGG1 315 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 OR5D16Q8NGK9 328 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 OR4C3Q8NH37 302 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 PIWIL2Q8TC59 973 aaKnown RBP13.09□□□□□ -0.31
TUBE1-208ENST00000604743 FAM110BQ8TC76 370 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 LRRC8CQ8TDW0 803 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 MARVELD3Q96A59 401 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 MOAP1Q96BY2 351 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 DTNBP1Q96EV8 351 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 WDYHV1Q96HA8 205 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 TEX37Q96LM6 180 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 TRIB1Q96RU8 372 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 STACQ99469 402 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 BTBD2Q9BX70 525 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 PIGUQ9H490 435 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 GPATCH2Q9NW75 528 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 GIN1Q9NXP7 522 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 Q9UFV3 132 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 KCNE3Q9Y6H6 103 aa13.09□□□□□ -0.31
TUBE1-208ENST00000604743 NPIPA5A0A0B4J1W7 369 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 RNF103-CHMP3A0A140T963 221 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 NPIPA7E9PJI5 369 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 RNASET2O00584 256 aaKnown RBP13.08□□□□□ -0.32
TUBE1-208ENST00000604743 KLF11O14901 512 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 NDUFB5O43674 189 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 ZIC3O60481 467 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 DIAPH2O60879 1101 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 OXSR1O95747 527 aaPredicted RBP13.08□□□□□ -0.32
TUBE1-208ENST00000604743 ACTL6AO96019 429 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 KRT16P08779 473 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 NPIPA8P0DM63 369 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 COX6B1P14854 86 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 ATP6V1C1P21283 382 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 MATN1P21941 496 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 S100A3P33764 101 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 PTGER4P35408 488 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 ZFP36L2P47974 494 aaKnown RBP13.08□□□□□ -0.32
TUBE1-208ENST00000604743 RNF144AP50876 292 aaPredicted RBP13.08□□□□□ -0.32
TUBE1-208ENST00000604743 DGKQP52824 942 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 C17orf67Q0P5P2 114 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.08□□□□□ -0.32
TUBE1-208ENST00000604743 ACSF3Q4G176 576 aaPredicted RBP13.08□□□□□ -0.32
TUBE1-208ENST00000604743 EXOSC6Q5RKV6 272 aaKnown RBP13.08□□□□□ -0.32
TUBE1-208ENST00000604743 ANXA8L1Q5VT79 327 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 RAET1LQ5VY80 246 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 BHLHB9Q6PI77 547 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 ENPP6Q6UWR7 440 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 MAVSQ7Z434 540 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 C6orf120Q7Z4R8 191 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 FADS6Q8N9I5 356 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 OR5M1Q8NGP8 315 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 LILRB4Q8NHJ6 448 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 TESCQ96BS2 214 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 SLC35G5Q96KT7 338 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 OR7D2Q96RA2 312 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 ZBTB18Q99592 522 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 SH3GL2Q99962 352 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 G6PC3Q9BUM1 346 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 PRDM14Q9GZV8 571 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 PTGES2Q9H7Z7 377 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 DUSP22Q9NRW4 184 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 PCDHGB3Q9Y5G1 929 aa13.08□□□□□ -0.32
TUBE1-208ENST00000604743 MED12LQ86YW9 2145 aa13.07□□□□□ -0.32
TUBE1-208ENST00000604743 PRSS51A0A1B0GVH4 220 aa13.07□□□□□ -0.32
TUBE1-208ENST00000604743 HMGB1P1B2RPK0 211 aaPredicted RBP13.07□□□□□ -0.32
TUBE1-208ENST00000604743 E9PBE3 544 aa13.07□□□□□ -0.32
TUBE1-208ENST00000604743 H0Y3Z8 333 aa13.07□□□□□ -0.32
TUBE1-208ENST00000604743 SCDO00767 359 aa13.07□□□□□ -0.32
TUBE1-208ENST00000604743 HNRNPRO43390 633 aaKnown RBP13.07□□□□□ -0.32
TUBE1-208ENST00000604743 SCN2BO60939 215 aa13.07□□□□□ -0.32
TUBE1-208ENST00000604743 EPPINO95925 133 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms