RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 KANK1Q14678 1352 aa3.4□□□□□ -1.86
AC004542.1-201ENST00000602955 IGLV7-46A0A075B6I9 117 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 IGLV4-3A0A075B6K6 122 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 HELTA6NFD8 242 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 ZNF716A6NP11 495 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 PDHXO00330 501 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 ZNF264O43296 627 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 KLHL41O60662 606 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 IGHV3-9P01782 118 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 SP1P08047 785 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 SNRPCP09234 159 aaKnown RBP3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 ZNF735P0CB33 412 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 PNMTP11086 282 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 NCF2P19878 526 aaPredicted RBP3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 IGFBP5P24593 272 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 SPRP35270 261 aaPredicted RBP3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 RPL4P36578 427 aaKnown RBP3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 HPCAL1P37235 193 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 SLC1A4P43007 532 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 CASP4P49662 377 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 RIDAP52758 137 aaKnown RBP3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 AP3M2P53677 418 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 MFAP2P55001 183 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 NDUFV3P56181 108 aaKnown RBP3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 BDH1Q02338 343 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 PLOD1Q02809 727 aaPredicted RBP3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 LY6DQ14210 128 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 SCN5AQ14524 2016 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 SIX1Q15475 284 aaPredicted RBP3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 PCK2Q16822 640 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 TMEM52BQ4KMG9 183 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 FAM219BQ5XKK7 198 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 TRPM8Q7Z2W7 1104 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 NANOGNBQ7Z5D8 188 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 RNF130Q86XS8 419 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 ZSCAN4Q8NAM6 433 aaPredicted RBP3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 OR1F12Q8NHA8 337 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 M1APQ8TC57 530 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 TBCKQ8TEA7 893 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 MOCOSQ96EN8 888 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 SDSLQ96GA7 329 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 C12orf66Q96MD2 445 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 PRICKLE1Q96MT3 831 aaPredicted RBP3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 RBM4Q9BWF3 364 aaKnown RBP3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 DUSP16Q9BY84 665 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 PKIBQ9C010 78 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 SGK2Q9HBY8 427 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 ABCC13Q9NSE7 274 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 BARX2Q9UMQ3 279 aaPredicted RBP3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 GAB2Q9UQC2 676 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 CPQQ9Y646 472 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 AUP1Q9Y679 476 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 MAD1L1Q9Y6D9 718 aa3.4□□□□□ -1.87
AC004542.1-201ENST00000602955 TEX48A0A1B0GUV7 120 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 OR52A4PA6NMU1 304 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 MSH4O15457 936 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 IDH3BO43837 385 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 TRIM3O75382 744 aaPredicted RBP3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 RHBDL1O75783 438 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 CIB2O75838 187 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 F10P00742 488 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 CFC1BP0CG36 223 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 CFC1P0CG37 223 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 HSD17B1P14061 328 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 UGT1A4P22310 534 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 CCNCP24863 283 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 ATP5A1P25705 553 aaKnown RBP3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 CCT3P49368 545 aaKnown RBP3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 NOVA1P51513 510 aaKnown RBP3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 RGS1Q08116 209 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 COX10Q12887 443 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 NECTIN1Q15223 517 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 SNAI3Q3KNW1 292 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 REP15Q6BDI9 236 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 ACSM5Q6NUN0 579 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 CCDC80Q76M96 950 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 RUFY3Q7L099 469 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 PRSS48Q7RTY5 328 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 MOB3BQ86TA1 216 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 LRRTM1Q86UE6 522 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 IFNEQ86WN2 208 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 NR2C2APQ86WQ0 139 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 NBPF5PQ86XG9 351 aaPredicted RBP3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 BPIFB2Q8N4F0 458 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 ARL14Q8N4G2 192 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 SUMF1Q8NBK3 374 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 PRSS33Q8NF86 280 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 OR10A7Q8NGE5 316 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 ZNF671Q8TAW3 534 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 HCAR2Q8TDS4 363 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 AENQ8WTP8 325 aaKnown RBP3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 CRYGNQ8WXF5 182 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 GTF3AQ92664 365 aaKnown RBP3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 RAB3CQ96E17 227 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 ART5Q96L15 291 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 DUX3Q96PT4 197 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 SLC6A7Q99884 636 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 TUBGCP2Q9BSJ2 902 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 FGFBP2Q9BYJ0 223 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 GPR61Q9BZJ8 451 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms