RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 LY6G5CQ5SRR4 150 aa9.11□□□□□ -0.95
CSMD1-217ENST00000602723 KIAA0319Q5VV43 1072 aa9.11□□□□□ -0.95
CSMD1-217ENST00000602723 SLC7A5P1Q8MH63 180 aa9.11□□□□□ -0.95
CSMD1-217ENST00000602723 PRR11Q96HE9 360 aaPredicted RBP9.11□□□□□ -0.95
CSMD1-217ENST00000602723 ZNF419Q96HQ0 510 aaPredicted RBP9.11□□□□□ -0.95
CSMD1-217ENST00000602723 THAP7Q9BT49 309 aaPredicted RBP9.11□□□□□ -0.95
CSMD1-217ENST00000602723 C4AP0C0L4 1744 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 C4BP0C0L5 1744 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 GIFP27352 417 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 HOXD12P35452 270 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 TCEAL1Q15170 157 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 SF3A2Q15428 464 aaKnown RBP9.1□□□□□ -0.95
CSMD1-217ENST00000602723 WDR45BQ5MNZ6 344 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 PAPD5Q8NDF8 572 aaKnown RBP9.1□□□□□ -0.95
CSMD1-217ENST00000602723 PAQR8Q8TEZ7 354 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 TOMM40LQ969M1 308 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 ECHDC3Q96DC8 303 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 INPP5KQ9BT40 448 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 OR6C2Q9NZP2 312 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 TMEM181Q9P2C4 612 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 ZNF223Q9UK11 482 aaPredicted RBP9.1□□□□□ -0.95
CSMD1-217ENST00000602723 TXNL1O43396 289 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 MRPS14O60783 128 aaKnown RBP9.1□□□□□ -0.95
CSMD1-217ENST00000602723 PPP1R3DO95685 299 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 S1PR4O95977 384 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 ETV4P43268 484 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 STK19P49842 368 aaPredicted RBP9.1□□□□□ -0.95
CSMD1-217ENST00000602723 IGFN1Q86VF2 1251 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 IFNL1Q8IU54 200 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 MTMR14Q8NCE2 650 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 ANKK1Q8NFD2 765 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 OR9Q2Q8NGE9 314 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 SLC2A12Q8TD20 617 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 F2RL3Q96RI0 385 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 SLC38A1Q9H2H9 487 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 PLEKHJ1Q9NW61 149 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 MEGF11A6BM72 1044 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 ZNF43P17038 809 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 RBMS1P29558 406 aaKnown RBP9.1□□□□□ -0.95
CSMD1-217ENST00000602723 OR7G1Q8NGA0 311 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 OR51L1Q8NGJ5 315 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 GCDHQ92947 438 aaPredicted RBP9.1□□□□□ -0.95
CSMD1-217ENST00000602723 SAMD8Q96LT4 415 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 SLC2A4RGQ9NR83 387 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 LUZP4Q9P127 313 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 GPR34Q9UPC5 381 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 HPGDSO60760 199 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 LAMP1P11279 417 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 MAP4K2Q12851 820 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 DEFB119Q8N690 84 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 ACTRT3Q9BYD9 372 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 CWH43Q9H720 699 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 IL21RQ9HBE5 538 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 CACNA1GO43497 2377 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.1□□□□□ -0.95
CSMD1-217ENST00000602723 C17orf113A0A1B0GUU1 675 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 AIPO00170 330 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 FAM69AQ5T7M9 428 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 TSSK4Q6SA08 328 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 CPOQ8IVL8 374 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 OR51Q1Q8NH59 317 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 TBC1D20Q96BZ9 403 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 TRMT2BQ96GJ1 504 aaKnown RBP9.1□□□□□ -0.95
CSMD1-217ENST00000602723 SERPINA7P05543 415 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 SERPINE2P07093 398 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 OSMP13725 252 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 AFF3P51826 1226 aaKnown RBP9.1□□□□□ -0.95
CSMD1-217ENST00000602723 PLGLAQ15195 96 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 POU4F3Q15319 338 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 COMMD6Q7Z4G1 85 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 DTWD1Q8N5C7 304 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 L3HYPDHQ96EM0 354 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 E7ESA3 106 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 NME4O00746 187 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 NUPL2O15504 423 aaKnown RBP9.1□□□□□ -0.95
CSMD1-217ENST00000602723 UBBP0CG47 229 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 UBCP0CG48 685 aaKnown RBP9.1□□□□□ -0.95
CSMD1-217ENST00000602723 PRKCZQ05513 592 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 MGAT3Q09327 533 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 UNC5DQ6UXZ4 953 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 OR52N2Q8NGI0 321 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 LRRC46Q96FV0 321 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 PAPOLGQ9BWT3 736 aaKnown RBP9.1□□□□□ -0.95
CSMD1-217ENST00000602723 HOXD1Q9GZZ0 328 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 PRDM9Q9NQV7 894 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 CLDND1Q9NY35 253 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 SIX4Q9UIU6 781 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 OR1A2Q9Y585 309 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 HLA-AP01891 365 aaKnown RBP9.1□□□□□ -0.95
CSMD1-217ENST00000602723 CD79BP40259 229 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 FAPQ12884 760 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 CDK5R2Q13319 367 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 ELAVL3Q14576 367 aaKnown RBP9.1□□□□□ -0.95
CSMD1-217ENST00000602723 FCRLBQ6BAA4 426 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 OR4C11Q6IEV9 310 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 GRASPQ7Z6J2 395 aaPredicted RBP9.1□□□□□ -0.95
CSMD1-217ENST00000602723 ST6GALNAC5Q9BVH7 336 aa9.1□□□□□ -0.95
CSMD1-217ENST00000602723 DUX1O43812 170 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 MPC1LP0DKB6 136 aa9.09□□□□□ -0.95
CSMD1-217ENST00000602723 ARL6IP1Q15041 203 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms