RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 PCMT1P22061 227 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 GALNSP34059 522 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 NOVA1P51513 510 aaKnown RBP16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 CHRNEQ04844 493 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 NCF4Q15080 339 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 HEPHL1Q6MZM0 1159 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 SLC16A12Q6ZSM3 486 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 CDRT4Q8N9R6 151 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 ZSCAN1Q8NBB4 408 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 GPR32P1Q8NGA4 272 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 ZG16BQ96DA0 208 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 LMF1Q96S06 567 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 NODALQ96S42 347 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 NUDT9Q9BW91 350 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 FUNDC2Q9BWH2 189 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 SPRY4Q9C004 299 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 PIGUQ9H490 435 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 PALMDQ9NP74 551 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 GIN1Q9NXP7 522 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 SNX5Q9Y5X3 404 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 U3KQV3 271 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 PRAMEF2O60811 474 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 KLF7O75840 302 aaPredicted RBP16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 KLK3P07288 261 aaPredicted RBP16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 CCDC159P0C7I6 412 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 ZNF12P17014 697 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 CSRP1P21291 193 aaKnown RBP16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 EMP2P54851 167 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 SLC37A1P57057 533 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 CRB2Q5IJ48 1285 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 FIGNL1Q6PIW4 674 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 C16orf62Q7Z3J2 963 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 ZDHHC21Q8IVQ6 265 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 WDR36Q8NI36 951 aaKnown RBP16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 COL21A1Q96P44 957 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 WDR77Q9BQA1 342 aaPredicted RBP16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 WFDC6Q9BQY6 131 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 EXD2Q9NVH0 621 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 SAMD4AQ9UPU9 718 aaKnown RBP16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 CLCA3PQ9Y6N3 262 aa16.07■□□□□ 0.16
PPFIA3-207ENST00000602716 NPIPA5A0A0B4J1W7 369 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 NPIPA7E9PJI5 369 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 MITFO75030 526 aaPredicted RBP16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 ALOX5P09917 674 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 NPIPA8P0DM63 369 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 GABRA3P34903 492 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 MAGEA8P43361 318 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 RNF144AP50876 292 aaPredicted RBP16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 CRISP3P54108 245 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 MLLT10P55197 1068 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 RPS18P62269 152 aaKnown RBP16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 KCNJ10P78508 379 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 CDK5R2Q13319 367 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 AQP6Q13520 282 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 FRRS1Q6ZNA5 592 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 TSEN54Q7Z6J9 526 aaKnown RBP16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 LSRQ86X29 649 aaPredicted RBP16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 GPR151Q8TDV0 419 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 LMF2Q9BU23 707 aaKnown RBP16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 DGCR6LQ9BY27 220 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 WARS2Q9UGM6 360 aaKnown RBP16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 ENPP5Q9UJA9 477 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 BAG5Q9UL15 447 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 MKLN1Q9UL63 735 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 ABCG2Q9UNQ0 655 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 hCG_2039718K7EN88 272 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 NKX2-2O95096 273 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 MFN2O95140 757 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 IGKV1D-16P01601 117 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 CT45A8P0DMV1 189 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 CT45A9P0DMV2 189 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 IGFBP5P24593 272 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 GP2P55259 537 aaKnown RBP16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 VLDLRP98155 873 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 RAPSNQ13702 412 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 SPCS2Q15005 226 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 DUSP7Q16829 419 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 CT45A2Q5DJT8 189 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 DCST2Q5T1A1 773 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 CYP4Z1Q86W10 505 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 C9orf40Q8IXQ3 194 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 SLC15A4Q8N697 577 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 COX18Q8N8Q8 333 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 PIK3C3Q8NEB9 887 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 SNRNP27Q8WVK2 155 aaKnown RBP16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 TRUB1Q8WWH5 349 aaKnown RBP16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 BARD1Q99728 777 aaKnown RBP16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 DUSP22Q9NRW4 184 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 THUMPD1Q9NXG2 353 aaKnown RBP16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 DSPPQ9NZW4 1301 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 ZNF223Q9UK11 482 aaPredicted RBP16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 PTRH2Q9Y3E5 179 aaKnown RBP16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 PCDHGB1Q9Y5G3 927 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 PCDHGA3Q9Y5H0 932 aa16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 GPC6Q9Y625 555 aaPredicted RBP16.06■□□□□ 0.16
PPFIA3-207ENST00000602716 PTGES3LE9PB15 166 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 SUV39H1O43463 412 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 BCAS1O75363 584 aaPredicted RBP16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 INMTO95050 263 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 DIRAS1O95057 198 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms