RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 QRSL1Q9H0R6 528 aaKnown RBP18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 SACM1LQ9NTJ5 587 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 TAS2R1Q9NYW7 299 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 RALYQ9UKM9 306 aaKnown RBP18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 PCDHGA10Q9Y5H3 936 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 HRH3Q9Y5N1 445 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 ZFYVE26Q68DK2 2539 aa18.34■□□□□ 0.53
SHKBP1-222ENST00000600320 ITPR1Q14643 2758 aa18.33■□□□□ 0.53
SHKBP1-222ENST00000600320 C17orf51A8MQB3 221 aa18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 FAM220BPB1ANY3 271 aa18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 SCO2O43819 266 aa18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 KIAA0513O60268 411 aa18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 P04436 131 aa18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 LCN1P31025 176 aa18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 EVI2BP34910 448 aa18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 DNASE1L1P49184 302 aa18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 GSK3BP49841 420 aa18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 RNF144AP50876 292 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 CRISP3P54108 245 aa18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 ATP12AP54707 1039 aa18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 EEFSECP57772 596 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 HPCAP84074 193 aa18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 SCARB2Q14108 478 aa18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 ZNF169Q14929 603 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 MAPK14Q16539 360 aa18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 ZNF630Q2M218 657 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 AP1ARQ63HQ0 302 aa18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 IFNEQ86WN2 208 aa18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 SULF2Q8IWU5 870 aa18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 UBL7Q96S82 380 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 TREX2Q9BQ50 279 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 METTL7AQ9H8H3 244 aa18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 GALNT9Q9HCQ5 603 aa18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 SPAG4Q9NPE6 437 aa18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 POLE3Q9NRF9 147 aa18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 ADA2Q9NZK5 511 aa18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 CNIH4Q9P003 139 aa18.33■□□□□ 0.52
SHKBP1-222ENST00000600320 DSPPQ9NZW4 1301 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 C2orf72A6NCS6 295 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 UGT2B17O75795 530 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 PGM3O95394 542 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 NGFRP08138 427 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 SFTPCP11686 197 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 CNR1P21554 472 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 TBXA2RP21731 343 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 PCGF2P35227 344 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 GAS1P54826 345 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 RPP38P78345 283 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 RBBP4Q09028 425 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 VMACQ2NL98 169 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 TMEM81Q6P7N7 255 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 MARCH3Q86UD3 253 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 RNF148Q8N7C7 305 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 Q8NA96 180 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 GATSQ8NAP1 163 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 C11orf65Q8NCR3 313 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 REXO5Q96IC2 774 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 CDRT15Q96T59 188 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 SPATA9Q9BWV2 254 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 OSBPL11Q9BXB4 747 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 ANGPTL4Q9BY76 406 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 BCL2L10Q9HD36 194 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 UBQLN4Q9NRR5 601 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 NDE1Q9NXR1 346 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 B3GNT3Q9Y2A9 372 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 AP3M1Q9Y2T2 418 aa18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 KLF13Q9Y2Y9 288 aaPredicted RBP18.32■□□□□ 0.52
SHKBP1-222ENST00000600320 ANKRD33BA6NCL7 494 aa18.31■□□□□ 0.52
SHKBP1-222ENST00000600320 TMEM247A6NEH6 219 aa18.31■□□□□ 0.52
SHKBP1-222ENST00000600320 PRORSD1PA6NEY8 169 aa18.31■□□□□ 0.52
SHKBP1-222ENST00000600320 ATXN7O15265 892 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-222ENST00000600320 PEX1O43933 1283 aa18.31■□□□□ 0.52
SHKBP1-222ENST00000600320 GCM2O75603 506 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-222ENST00000600320 AQP1P29972 269 aa18.31■□□□□ 0.52
SHKBP1-222ENST00000600320 GABPB1Q06547 395 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-222ENST00000600320 INPP5JQ15735 1006 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-222ENST00000600320 CD226Q15762 336 aa18.31■□□□□ 0.52
SHKBP1-222ENST00000600320 ZNF141Q15928 474 aa18.31■□□□□ 0.52
SHKBP1-222ENST00000600320 REEP3Q6NUK4 255 aa18.31■□□□□ 0.52
SHKBP1-222ENST00000600320 PTRH1Q86Y79 214 aaKnown RBP18.31■□□□□ 0.52
SHKBP1-222ENST00000600320 METTL25Q8N6Q8 603 aa18.31■□□□□ 0.52
SHKBP1-222ENST00000600320 TMEM178AQ8NBL3 297 aa18.31■□□□□ 0.52
SHKBP1-222ENST00000600320 HIPK4Q8NE63 616 aa18.31■□□□□ 0.52
SHKBP1-222ENST00000600320 OR2T12Q8NG77 320 aa18.31■□□□□ 0.52
SHKBP1-222ENST00000600320 C1orf21Q9H246 121 aa18.31■□□□□ 0.52
SHKBP1-222ENST00000600320 ALG2Q9H553 416 aa18.31■□□□□ 0.52
SHKBP1-222ENST00000600320 KLRF1Q9NZS2 232 aa18.31■□□□□ 0.52
SHKBP1-222ENST00000600320 CALML5Q9NZT1 146 aa18.31■□□□□ 0.52
SHKBP1-222ENST00000600320 ABCG2Q9UNQ0 655 aa18.31■□□□□ 0.52
SHKBP1-222ENST00000600320 PCDHGB6Q9Y5F9 930 aa18.31■□□□□ 0.52
SHKBP1-222ENST00000600320 A0A0G2JPF8 293 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 HNRNPCL2B2RXH8 293 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 B4DXG7 233 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 HNRNPCL3B7ZW38 293 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 ALG1L2C9J202 215 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 C5orf58C9J3I9 102 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 HNRNPCL1O60812 293 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 HNRNPCL4P0DMR1 293 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 RPS4Y1P22090 263 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 MEOX1P50221 254 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms