RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 SLC22A16Q86VW1 577 aa17.68■□□□□ 0.42
UPF1-209ENST00000600310 SIAH3Q8IW03 269 aa17.68■□□□□ 0.42
UPF1-209ENST00000600310 LRRC58Q96CX6 371 aa17.68■□□□□ 0.42
UPF1-209ENST00000600310 CMTM5Q96DZ9 223 aa17.68■□□□□ 0.42
UPF1-209ENST00000600310 JSRP1Q96MG2 331 aaPredicted RBP17.68■□□□□ 0.42
UPF1-209ENST00000600310 TRNT1Q96Q11 434 aaKnown RBP17.68■□□□□ 0.42
UPF1-209ENST00000600310 SLX1AQ9BQ83 275 aa17.68■□□□□ 0.42
UPF1-209ENST00000600310 TBL1XR1Q9BZK7 514 aa17.68■□□□□ 0.42
UPF1-209ENST00000600310 SAP130Q9H0E3 1048 aa17.68■□□□□ 0.42
UPF1-209ENST00000600310 IKZF5Q9H5V7 419 aa17.68■□□□□ 0.42
UPF1-209ENST00000600310 WIF1Q9Y5W5 379 aa17.68■□□□□ 0.42
UPF1-209ENST00000600310 BSNQ9UPA5 3926 aa17.67■□□□□ 0.42
UPF1-209ENST00000600310 C2orf72A6NCS6 295 aa17.67■□□□□ 0.42
UPF1-209ENST00000600310 FXYD1O00168 92 aa17.67■□□□□ 0.42
UPF1-209ENST00000600310 SCO2O43819 266 aa17.67■□□□□ 0.42
UPF1-209ENST00000600310 FCMRO60667 390 aa17.67■□□□□ 0.42
UPF1-209ENST00000600310 TNFRSF21O75509 655 aa17.67■□□□□ 0.42
UPF1-209ENST00000600310 ZIC2O95409 532 aaPredicted RBP17.67■□□□□ 0.42
UPF1-209ENST00000600310 ELAVL4P26378 380 aaKnown RBP17.67■□□□□ 0.42
UPF1-209ENST00000600310 DCTP40126 519 aa17.67■□□□□ 0.42
UPF1-209ENST00000600310 ATP12AP54707 1039 aa17.67■□□□□ 0.42
UPF1-209ENST00000600310 FLYWCH1Q4VC44 716 aa17.67■□□□□ 0.42
UPF1-209ENST00000600310 GPAT3Q53EU6 434 aa17.67■□□□□ 0.42
UPF1-209ENST00000600310 FAM91A1Q658Y4 838 aa17.67■□□□□ 0.42
UPF1-209ENST00000600310 TMEM251Q8N6I4 163 aa17.67■□□□□ 0.42
UPF1-209ENST00000600310 ANKFN1Q8N957 763 aa17.67■□□□□ 0.42
UPF1-209ENST00000600310 RCN3Q96D15 328 aa17.67■□□□□ 0.42
UPF1-209ENST00000600310 RTN4RQ9BZR6 473 aa17.67■□□□□ 0.42
UPF1-209ENST00000600310 SDHAF3Q9NRP4 125 aa17.67■□□□□ 0.42
UPF1-209ENST00000600310 GID8Q9NWU2 228 aa17.67■□□□□ 0.42
UPF1-209ENST00000600310 P2RX2Q9UBL9 471 aa17.67■□□□□ 0.42
UPF1-209ENST00000600310 WDR45Q9Y484 360 aa17.67■□□□□ 0.42
UPF1-209ENST00000600310 NPIPA5A0A0B4J1W7 369 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 A0A1W2PQD3 144 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 NPIPA7E9PJI5 369 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 SCDO00767 359 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 NDUFAB1O14561 156 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 TFECO14948 347 aaPredicted RBP17.66■□□□□ 0.42
UPF1-209ENST00000600310 H6PDO95479 791 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 NUDT7P0C024 238 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 TFPTP0C1Z6 253 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 RFPL3SP0C7P2 107 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 NPIPA8P0DM63 369 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 NR2F1P10589 423 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 HPGDP15428 266 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 TDGF1P3P51864 188 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 CAPRIN1Q14444 709 aaKnown RBP17.66■□□□□ 0.42
UPF1-209ENST00000600310 MAPK11Q15759 364 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 ZNF141Q15928 474 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 SYPL1Q16563 259 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 KLHL26Q53HC5 615 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 TYW3Q6IPR3 259 aaKnown RBP17.66■□□□□ 0.42
UPF1-209ENST00000600310 BNC2Q6ZN30 1099 aaPredicted RBP17.66■□□□□ 0.42
UPF1-209ENST00000600310 FRRS1Q6ZNA5 592 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 LRRC74BQ6ZQY2 392 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 OLIG3Q7RTU3 272 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 ZNF605Q86T29 641 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 MARCH3Q86UD3 253 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 ZNF619Q8N2I2 560 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 C10orf111Q8N326 155 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 FAM109AQ8N4B1 249 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 WDSUB1Q8N9V3 476 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 ZNF527Q8NB42 609 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 OR1J4Q8NGS1 313 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 BCAS4Q8TDM0 211 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 OIT3Q8WWZ8 545 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 MIB2Q96AX9 1013 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 ZNF703Q9H7S9 590 aaPredicted RBP17.66■□□□□ 0.42
UPF1-209ENST00000600310 ZDHHC11Q9H8X9 412 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 QPCTLQ9NXS2 382 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 MKLN1Q9UL63 735 aa17.66■□□□□ 0.42
UPF1-209ENST00000600310 FAM166BA8MTA8 275 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 NPIPA5E9PKD4 350 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 GNB5O14775 395 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 KIAA0513O60268 411 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 ANGPTL1O95841 491 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 CHRM4P08173 479 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 PLA2G2AP14555 144 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 MTPNP58546 118 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 HPCAP84074 193 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 CHRNEQ04844 493 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 GPR68Q15743 365 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 KRTCAP3Q53RY4 240 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 GCNT6Q5T4J0 391 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 NANOGP8Q6NSW7 305 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 PLCZ1Q86YW0 608 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 SLC38A5Q8WUX1 472 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 GPR137Q96N19 417 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 GNRHR2Q96P88 292 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 SH3GL1Q99961 368 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 SLC39A3Q9BRY0 314 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 THUMPD3Q9BV44 507 aaKnown RBP17.65■□□□□ 0.42
UPF1-209ENST00000600310 SLC38A1Q9H2H9 487 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 UBQLN3Q9H347 655 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 NANOGQ9H9S0 305 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 EFCAB1Q9HAE3 211 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 HHATLQ9HCP6 504 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 A4GALTQ9NPC4 353 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 B4GALT7Q9UBV7 327 aa17.65■□□□□ 0.42
UPF1-209ENST00000600310 NPIPA1Q9UND3 350 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms