RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 C7orf72A4D263 438 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 A8MT66 165 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 ZNF814B7Z6K7 855 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 PHF1O43189 567 aaPredicted RBP5.44□□□□□ -1.54
VRK3-220ENST00000600259 CXCL13O43927 109 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 ADAM11O75078 769 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 NTN1O95631 604 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 ANGPTL1O95841 491 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 OTCP00480 354 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 OPN1LWP04000 364 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 COL6A2P12110 1019 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 FCGR2AP12318 317 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 HSD3B1P14060 373 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 CR1P17927 2039 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 HSD3B2P26439 372 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 ADH6P28332 368 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 MPIP34949 423 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 KRT20P35900 424 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 CDKN1AP38936 164 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 EIF1AXP47813 144 aaKnown RBP5.44□□□□□ -1.54
VRK3-220ENST00000600259 HTR6P50406 440 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 SERPINB8P50452 374 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 RAC1P63000 192 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 CAV1Q03135 178 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 CLCQ05315 142 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 C17orf67Q0P5P2 114 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 CSTF3Q12996 717 aaKnown RBP5.44□□□□□ -1.54
VRK3-220ENST00000600259 STX5Q13190 355 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 VEZF1Q14119 521 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 TSC22D1Q15714 1073 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 TAB1Q15750 504 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 SGCBQ16585 318 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 ERCC6LQ2NKX8 1250 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 KRTAP24-1Q3LI83 254 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 ZNF672Q499Z4 452 aaPredicted RBP5.44□□□□□ -1.54
VRK3-220ENST00000600259 SFRP5Q5T4F7 317 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 CPTPQ5TA50 214 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 LGSNQ5TDP6 509 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 FAM71E1Q6IPT2 247 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 KLC3Q6P597 504 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 BEND4Q6ZU67 534 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.44□□□□□ -1.54
VRK3-220ENST00000600259 NUFIP2Q7Z417 695 aaKnown RBP5.44□□□□□ -1.54
VRK3-220ENST00000600259 ZAR1Q86SH2 424 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 DTX2Q86UW9 622 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 CCDC25Q86WR0 208 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 SAMD14Q8IZD0 417 aaPredicted RBP5.44□□□□□ -1.54
VRK3-220ENST00000600259 OR2L13Q8N349 312 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 GTPBP8Q8N3Z3 284 aaPredicted RBP5.44□□□□□ -1.54
VRK3-220ENST00000600259 OR4C3Q8NH37 302 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 PIWIL2Q8TC59 973 aaKnown RBP5.44□□□□□ -1.54
VRK3-220ENST00000600259 FAM110BQ8TC76 370 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 SMAP2Q8WU79 429 aaPredicted RBP5.44□□□□□ -1.54
VRK3-220ENST00000600259 OSTF1Q92882 214 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 GFM2Q969S9 779 aaKnown RBP5.44□□□□□ -1.54
VRK3-220ENST00000600259 S100PBPQ96BU1 408 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 ZNF524Q96C55 264 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 ELP4Q96EB1 424 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 TRMT61AQ96FX7 289 aaKnown RBP5.44□□□□□ -1.54
VRK3-220ENST00000600259 KCNK17Q96T54 332 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 NAPGQ99747 312 aaPredicted RBP5.44□□□□□ -1.54
VRK3-220ENST00000600259 MRPL57Q9BQC6 102 aaKnown RBP5.44□□□□□ -1.54
VRK3-220ENST00000600259 LMF2Q9BU23 707 aaKnown RBP5.44□□□□□ -1.54
VRK3-220ENST00000600259 TRAF4Q9BUZ4 470 aaPredicted RBP5.44□□□□□ -1.54
VRK3-220ENST00000600259 KRTAP3-3Q9BYR6 98 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 KRTAP3-2Q9BYR7 98 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 ACPTQ9BZG2 426 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 TRIM2Q9C040 744 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 VPS11Q9H270 941 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 GLIPR2Q9H4G4 154 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 ACSS3Q9H6R3 686 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 PTGES2Q9H7Z7 377 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 YAE1D1Q9NRH1 226 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 GLRX2Q9NS18 164 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 FBXO34Q9NWN3 711 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 NMRK1Q9NWW6 199 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 XPR1Q9UBH6 696 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 GDF2Q9UK05 429 aaPredicted RBP5.44□□□□□ -1.54
VRK3-220ENST00000600259 ING1Q9UK53 422 aaPredicted RBP5.44□□□□□ -1.54
VRK3-220ENST00000600259 TMCO1Q9UM00 188 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 SNX6Q9UNH7 406 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 LIPT1Q9Y234 373 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 EMC9Q9Y3B6 208 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 OR10H1Q9Y4A9 318 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 MAGED1Q9Y5V3 778 aaPredicted RBP5.44□□□□□ -1.54
VRK3-220ENST00000600259 IGHV4-30-2A0A087WSY4 118 aa5.43□□□□□ -1.54
VRK3-220ENST00000600259 A0A087WZY1 265 aa5.43□□□□□ -1.54
VRK3-220ENST00000600259 GOLGA8QA0A0J9YX86 632 aa5.43□□□□□ -1.54
VRK3-220ENST00000600259 A0A1W2PRB8 838 aa5.43□□□□□ -1.54
VRK3-220ENST00000600259 GOLGA8OA6NCC3 632 aa5.43□□□□□ -1.54
VRK3-220ENST00000600259 A8MV72 311 aaPredicted RBP5.43□□□□□ -1.54
VRK3-220ENST00000600259 SHISA9B4DS77 424 aa5.43□□□□□ -1.54
VRK3-220ENST00000600259 ALG1L2C9J202 215 aa5.43□□□□□ -1.54
VRK3-220ENST00000600259 GOLGA8NF8WBI6 632 aa5.43□□□□□ -1.54
VRK3-220ENST00000600259 GOLGA8RI6L899 631 aa5.43□□□□□ -1.54
VRK3-220ENST00000600259 EIF1AYO14602 144 aaKnown RBP5.43□□□□□ -1.54
VRK3-220ENST00000600259 PCDH7O60245 1069 aa5.43□□□□□ -1.54
VRK3-220ENST00000600259 DLX3O60479 287 aa5.43□□□□□ -1.54
VRK3-220ENST00000600259 RAMP1O60894 148 aa5.43□□□□□ -1.54
VRK3-220ENST00000600259 NKX2-2O95096 273 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms