RNA–Protein interactions for RNA: ENST00000599848.5

UPF1-207, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 1 (best) BASIC

Gene UPF1, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-207ENST00000599848 M0R036 132 aa19.3■□□□□ 0.68
UPF1-207ENST00000599848 SLC35E2BP0CK96 405 aa19.3■□□□□ 0.68
UPF1-207ENST00000599848 CKMT2P17540 419 aa19.3■□□□□ 0.68
UPF1-207ENST00000599848 OR7A5Q15622 319 aa19.3■□□□□ 0.68
UPF1-207ENST00000599848 SLC36A2Q495M3 483 aa19.3■□□□□ 0.68
UPF1-207ENST00000599848 ZMAT1Q5H9K5 638 aa19.3■□□□□ 0.68
UPF1-207ENST00000599848 POGLUT1Q8NBL1 392 aa19.3■□□□□ 0.68
UPF1-207ENST00000599848 SLC6A7Q99884 636 aa19.3■□□□□ 0.68
UPF1-207ENST00000599848 UNKLQ9H9P5 680 aaKnown RBP19.3■□□□□ 0.68
UPF1-207ENST00000599848 WASH6PQ9NQA3 447 aa19.3■□□□□ 0.68
UPF1-207ENST00000599848 VDAC3Q9Y277 283 aa19.3■□□□□ 0.68
UPF1-207ENST00000599848 LTB4RQ15722 352 aa19.3■□□□□ 0.68
UPF1-207ENST00000599848 SAMD12Q8N8I0 201 aa19.3■□□□□ 0.68
UPF1-207ENST00000599848 MFSD9Q8NBP5 474 aa19.3■□□□□ 0.68
UPF1-207ENST00000599848 EBF2Q9HAK2 575 aa19.3■□□□□ 0.68
UPF1-207ENST00000599848 OR6C70A6NIJ9 312 aa19.29■□□□□ 0.68
UPF1-207ENST00000599848 ZBTB22O15209 634 aa19.29■□□□□ 0.68
UPF1-207ENST00000599848 CSNK1EP49674 416 aaKnown RBP19.29■□□□□ 0.68
UPF1-207ENST00000599848 MADCAM1Q13477 382 aa19.29■□□□□ 0.68
UPF1-207ENST00000599848 KANK2Q63ZY3 851 aa19.29■□□□□ 0.68
UPF1-207ENST00000599848 MINDY1Q8N5J2 469 aa19.29■□□□□ 0.68
UPF1-207ENST00000599848 ZBP1Q9H171 429 aa19.29■□□□□ 0.68
UPF1-207ENST00000599848 TOR3AQ9H497 397 aa19.29■□□□□ 0.68
UPF1-207ENST00000599848 ENPP4Q9Y6X5 453 aa19.29■□□□□ 0.68
UPF1-207ENST00000599848 IFNA10P01566 189 aa19.29■□□□□ 0.68
UPF1-207ENST00000599848 TAS2R31P59538 309 aa19.29■□□□□ 0.68
UPF1-207ENST00000599848 KHDC1Q4VXA5 237 aaKnown RBP19.29■□□□□ 0.68
UPF1-207ENST00000599848 MKRN2OSH3BPM6 223 aa19.29■□□□□ 0.68
UPF1-207ENST00000599848 TNFRSF10CO14798 259 aa19.29■□□□□ 0.68
UPF1-207ENST00000599848 SERPINE2P07093 398 aa19.29■□□□□ 0.68
UPF1-207ENST00000599848 ADH7P40394 386 aa19.29■□□□□ 0.68
UPF1-207ENST00000599848 PLD6Q8N2A8 252 aaKnown RBP19.29■□□□□ 0.68
UPF1-207ENST00000599848 GALNT11Q8NCW6 608 aa19.29■□□□□ 0.68
UPF1-207ENST00000599848 MTNR1AP48039 350 aa19.29■□□□□ 0.68
UPF1-207ENST00000599848 SNU13P55769 128 aaKnown RBP19.29■□□□□ 0.68
UPF1-207ENST00000599848 GRB7Q14451 532 aa19.29■□□□□ 0.68
UPF1-207ENST00000599848 RBM39Q14498 530 aaKnown RBP19.29■□□□□ 0.68
UPF1-207ENST00000599848 DECR2Q9NUI1 292 aa19.29■□□□□ 0.68
UPF1-207ENST00000599848 EXTL2Q9UBQ6 330 aa19.29■□□□□ 0.68
UPF1-207ENST00000599848 LINC01553A4QN01 128 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 OR52A4PA6NMU1 304 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 TRAPPC2LH3BP13 241 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 SLC1A7O00341 560 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 DIRAS1O95057 198 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 YES1P07947 543 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 LCN1P31025 176 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 RGS19P49795 217 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 RPE65Q16518 533 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 RBMS3Q6XE24 437 aaKnown RBP19.28■□□□□ 0.68
UPF1-207ENST00000599848 SCD5Q86SK9 330 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 GALNT10Q86SR1 603 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 PHB2Q99623 299 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 TMEM9BQ9NQ34 198 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 CPOXP36551 454 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 OR9I1Q8NGQ6 314 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 ZNF675Q8TD23 568 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 TRUB1Q8WWH5 349 aaKnown RBP19.28■□□□□ 0.68
UPF1-207ENST00000599848 CHFRQ96EP1 664 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 SERPINA5P05154 406 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 FUT1P19526 365 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 PKLRP30613 574 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 CYCSP99999 105 aaKnown RBP19.28■□□□□ 0.68
UPF1-207ENST00000599848 DCST2Q5T1A1 773 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 SLC6A19Q695T7 634 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 C6orf15Q6UXA7 325 aaPredicted RBP19.28■□□□□ 0.68
UPF1-207ENST00000599848 RANBP10Q6VN20 620 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 PXKQ7Z7A4 578 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 RNF175Q8N4F7 328 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 OR7G3Q8NG95 312 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 WDR20Q8TBZ3 569 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 GIMAP5Q96F15 307 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 MMP27Q9H306 513 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 THAP10Q9P2Z0 257 aaPredicted RBP19.28■□□□□ 0.68
UPF1-207ENST00000599848 POLHQ9Y253 713 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 PIK3C2AO00443 1686 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 TECPR1Q7Z6L1 1165 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 OR4K13Q8NH42 304 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 TBCCD1Q9NVR7 557 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 B3GAT1Q9P2W7 334 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 PCDHGA8Q9Y5G5 932 aa19.28■□□□□ 0.68
UPF1-207ENST00000599848 MYOCOSA0A1B0GUC4 107 aa19.27■□□□□ 0.68
UPF1-207ENST00000599848 DDAH2O95865 285 aa19.27■□□□□ 0.68
UPF1-207ENST00000599848 PRLP01236 227 aa19.27■□□□□ 0.68
UPF1-207ENST00000599848 HSD11B1LQ7Z5J1 315 aa19.27■□□□□ 0.68
UPF1-207ENST00000599848 KIF18BQ86Y91 864 aa19.27■□□□□ 0.68
UPF1-207ENST00000599848 KRTCAP2Q8N6L1 136 aa19.27■□□□□ 0.68
UPF1-207ENST00000599848 OR4K5Q8NGD3 323 aa19.27■□□□□ 0.68
UPF1-207ENST00000599848 GPR148Q8TDV2 347 aa19.27■□□□□ 0.68
UPF1-207ENST00000599848 ASB17Q8WXJ9 295 aa19.27■□□□□ 0.68
UPF1-207ENST00000599848 NUDT9Q9BW91 350 aa19.27■□□□□ 0.68
UPF1-207ENST00000599848 ANKRD26Q9UPS8 1709 aa19.27■□□□□ 0.68
UPF1-207ENST00000599848 ZNF45Q02386 682 aa19.27■□□□□ 0.68
UPF1-207ENST00000599848 OR51T1Q8NGJ9 327 aa19.27■□□□□ 0.68
UPF1-207ENST00000599848 OR4K15Q8NH41 348 aa19.27■□□□□ 0.68
UPF1-207ENST00000599848 PCTPQ9UKL6 214 aa19.27■□□□□ 0.68
UPF1-207ENST00000599848 MON2Q7Z3U7 1717 aa19.27■□□□□ 0.68
UPF1-207ENST00000599848 SHISA7A6NL88 538 aa19.27■□□□□ 0.68
UPF1-207ENST00000599848 E7ESA3 106 aa19.27■□□□□ 0.68
UPF1-207ENST00000599848 SDHDO14521 159 aa19.27■□□□□ 0.68
UPF1-207ENST00000599848 CKMT1AP12532 417 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms