RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 GCNT2Q8N0V5 402 aa16.97■□□□□ 0.31
PNKP-213ENST00000599543 FAM76AQ8TAV0 307 aa16.97■□□□□ 0.31
PNKP-213ENST00000599543 NUDT8Q8WV74 236 aa16.97■□□□□ 0.31
PNKP-213ENST00000599543 RNF138Q8WVD3 245 aa16.97■□□□□ 0.31
PNKP-213ENST00000599543 TUBGCP3Q96CW5 907 aa16.97■□□□□ 0.31
PNKP-213ENST00000599543 YIPF4Q9BSR8 244 aa16.97■□□□□ 0.31
PNKP-213ENST00000599543 G6PC3Q9BUM1 346 aa16.97■□□□□ 0.31
PNKP-213ENST00000599543 NUF2Q9BZD4 464 aa16.97■□□□□ 0.31
PNKP-213ENST00000599543 DDX18Q9NVP1 670 aaKnown RBP16.97■□□□□ 0.31
PNKP-213ENST00000599543 CLCF1Q9UBD9 225 aa16.97■□□□□ 0.31
PNKP-213ENST00000599543 SNNO75324 88 aaPredicted RBP16.96■□□□□ 0.31
PNKP-213ENST00000599543 CD99P14209 185 aa16.96■□□□□ 0.31
PNKP-213ENST00000599543 GAS1P54826 345 aa16.96■□□□□ 0.31
PNKP-213ENST00000599543 DSCR4P56555 118 aaPredicted RBP16.96■□□□□ 0.31
PNKP-213ENST00000599543 CLDN18P56856 261 aa16.96■□□□□ 0.31
PNKP-213ENST00000599543 GAB1Q13480 694 aa16.96■□□□□ 0.31
PNKP-213ENST00000599543 ZNHIT3Q15649 155 aaPredicted RBP16.96■□□□□ 0.31
PNKP-213ENST00000599543 CYP27C1Q4G0S4 372 aa16.96■□□□□ 0.31
PNKP-213ENST00000599543 FAM71E1Q6IPT2 247 aa16.96■□□□□ 0.31
PNKP-213ENST00000599543 RNF165Q6ZSG1 346 aa16.96■□□□□ 0.31
PNKP-213ENST00000599543 IKBIPQ70UQ0 350 aa16.96■□□□□ 0.31
PNKP-213ENST00000599543 CHMP1BQ7LBR1 199 aa16.96■□□□□ 0.31
PNKP-213ENST00000599543 PIGMQ9H3S5 423 aa16.96■□□□□ 0.31
PNKP-213ENST00000599543 Q9N2J8 555 aa16.96■□□□□ 0.31
PNKP-213ENST00000599543 GALNT8Q9NY28 637 aa16.96■□□□□ 0.31
PNKP-213ENST00000599543 C19orf53Q9UNZ5 99 aaPredicted RBP16.96■□□□□ 0.31
PNKP-213ENST00000599543 WBP11Q9Y2W2 641 aaKnown RBP16.96■□□□□ 0.31
PNKP-213ENST00000599543 PCNX3Q9H6A9 2034 aa16.96■□□□□ 0.3
PNKP-213ENST00000599543 ZIC3O60481 467 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 GOSR1O95249 250 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 BCKDHAP12694 445 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 DIO3P55073 304 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 OCRLQ01968 901 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 DECR1Q16698 335 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 ATP6AP1LQ52LC2 224 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 C6orf136Q5SQH8 315 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 RAET1LQ5VY80 246 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 ATG16L1Q676U5 607 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 PAMR1Q6UXH9 720 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 P4HA3Q7Z4N8 544 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 OR2L13Q8N349 312 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 FNDC5Q8NAU1 212 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.95■□□□□ 0.3
PNKP-213ENST00000599543 DYDC1Q8WWB3 177 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 FCRL1Q96LA6 429 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 PPP3R2Q96LZ3 170 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 ALPK1Q96QP1 1244 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 GLIPR2Q9H4G4 154 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 SDHAF3Q9NRP4 125 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 THAP1Q9NVV9 213 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 TAS2R7Q9NYW3 318 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 MRTO4Q9UKD2 239 aaKnown RBP16.95■□□□□ 0.3
PNKP-213ENST00000599543 PACSIN3Q9UKS6 424 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 ABCG2Q9UNQ0 655 aa16.95■□□□□ 0.3
PNKP-213ENST00000599543 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.95■□□□□ 0.3
PNKP-213ENST00000599543 GOLGA8QA0A0J9YX86 632 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 GOLGA8OA6NCC3 632 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 C17orf51A8MQB3 221 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 B4DXG7 233 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 NPIPB8E9PQR5 432 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 GOLGA8NF8WBI6 632 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 UPK1AO00322 258 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 EFNA1P20827 205 aaPredicted RBP16.94■□□□□ 0.3
PNKP-213ENST00000599543 CPOXP36551 454 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 RFX3P48380 749 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 PSMD4P55036 377 aaKnown RBP16.94■□□□□ 0.3
PNKP-213ENST00000599543 EEF1A1P68104 462 aaKnown RBP16.94■□□□□ 0.3
PNKP-213ENST00000599543 STX5Q13190 355 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 GANABQ14697 944 aaKnown RBP16.94■□□□□ 0.3
PNKP-213ENST00000599543 BCL2A1Q16548 175 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 ZNF385BQ569K4 471 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 EEF1A1P5Q5VTE0 462 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 IL23RQ5VWK5 629 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 TGIF2LYQ8IUE0 185 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 UBQLNLQ8IYU4 475 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 FADS6Q8N9I5 356 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 AMDHD1Q96NU7 426 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 CCT7Q99832 543 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 TMUB1Q9BVT8 246 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 DSN1Q9H410 356 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 PTGES2Q9H7Z7 377 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 AKTIPQ9H8T0 292 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 SLCO1B3Q9NPD5 702 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 INTS9Q9NV88 658 aaKnown RBP16.94■□□□□ 0.3
PNKP-213ENST00000599543 HAO1Q9UJM8 370 aa16.94■□□□□ 0.3
PNKP-213ENST00000599543 HCRTR2O43614 444 aa16.93■□□□□ 0.3
PNKP-213ENST00000599543 PSMG1O95456 288 aa16.93■□□□□ 0.3
PNKP-213ENST00000599543 RAF1P04049 648 aa16.93■□□□□ 0.3
PNKP-213ENST00000599543 PEPDP12955 493 aa16.93■□□□□ 0.3
PNKP-213ENST00000599543 HK1P19367 917 aa16.93■□□□□ 0.3
PNKP-213ENST00000599543 CLK3P49761 638 aaKnown RBP16.93■□□□□ 0.3
PNKP-213ENST00000599543 B3GALT5-AS1P59052 145 aa16.93■□□□□ 0.3
PNKP-213ENST00000599543 KEAP1Q14145 624 aa16.93■□□□□ 0.3
PNKP-213ENST00000599543 OR2A2Q6IF42 318 aa16.93■□□□□ 0.3
PNKP-213ENST00000599543 CAMKMTQ7Z624 323 aa16.93■□□□□ 0.3
PNKP-213ENST00000599543 WDR75Q8IWA0 830 aaKnown RBP16.93■□□□□ 0.3
PNKP-213ENST00000599543 MEIOBQ8N635 442 aa16.93■□□□□ 0.3
PNKP-213ENST00000599543 OR2M3Q8NG83 312 aa16.93■□□□□ 0.3
PNKP-213ENST00000599543 LRRC8CQ8TDW0 803 aa16.93■□□□□ 0.3
PNKP-213ENST00000599543 ELP4Q96EB1 424 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms