RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 LOC100653049A0A140TA62 436 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 TCRBV16S1A1N1A0A5B0 115 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 SYNDIG1LA6NDD5 238 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 BBIP1A8MTZ0 92 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 PDPK1O15530 556 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 SUSD5O60279 629 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 KRT34O76011 436 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 ATP1B1P05026 303 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 SLC35E2P0CK97 266 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 CPMP14384 443 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 PORP16435 677 aaPredicted RBP12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 CSNK2A2P19784 350 aaPredicted RBP12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 GALNSP34059 522 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 SOX18P35713 384 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 PTH2RP49190 550 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 CLCN2P51788 898 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 ZNF136P52737 540 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 LRRC74AQ0VAA2 488 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 SLC13A2Q13183 592 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 STX5Q13190 355 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 SERTAD2Q14140 314 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 ZNF750Q32MQ0 723 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 TIGD2Q4W5G0 525 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 PAGE3Q5JUK9 113 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 ANXA8L1Q5VT79 327 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 HEPHL1Q6MZM0 1159 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 FAM180BQ6P0A1 224 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 POMZP3Q6PJE2 187 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 RETREG3Q86VR2 466 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 ARMC10Q8N2F6 343 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 FBXW8Q8N3Y1 598 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 DPP10Q8N608 796 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 POU5F2Q8N7G0 328 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 PSMA8Q8TAA3 256 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 GTF2H4Q92759 462 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 AMDHD1Q96NU7 426 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 FAM173AQ9BQD7 235 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 C19orf24Q9BVV8 132 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 ALOXE3Q9BYJ1 711 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 SLC6A15Q9H2J7 730 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 GLIPR2Q9H4G4 154 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 IL1RL2Q9HB29 575 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 TAGLN3Q9UI15 199 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 LEF1Q9UJU2 399 aaPredicted RBP12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 NDUFAF1Q9Y375 327 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 NPFFR2Q9Y5X5 522 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 ZNF780BQ9Y6R6 833 aa12.67□□□□□ -0.38
SHKBP1-218ENST00000598907 A0A1W2PRB8 838 aa12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 CASKO14936 926 aa12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 PRKNO60260 465 aaPredicted RBP12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 OR2J2O76002 312 aa12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 UBOX5O94941 541 aa12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 TP53P04637 393 aaPredicted RBP12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 IFI6P09912 130 aa12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 HOXB9P17482 250 aaPredicted RBP12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 PTPN6P29350 595 aa12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 FEN1P39748 380 aaKnown RBP12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 SOX3P41225 446 aa12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 STT3AP46977 705 aa12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 ID2Q02363 134 aa12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 SLC10A1Q14973 349 aa12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 ACSF3Q4G176 576 aaPredicted RBP12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 SLC2A7Q6PXP3 512 aa12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 HIPK1Q86Z02 1210 aa12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 CCDC116Q8IYX3 515 aa12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 ST13P4Q8IZP2 240 aaPredicted RBP12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 CLECL1Q8IZS7 167 aa12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 LRRC25Q8N386 305 aaPredicted RBP12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 APCDD1LQ8NCL9 501 aa12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 VPS37AQ8NEZ2 397 aa12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 OR5P2Q8WZ92 322 aa12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 ZBED6CLQ96FA7 236 aaPredicted RBP12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 NSL1Q96IY1 281 aa12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 DACH2Q96NX9 599 aa12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 GIMAP4Q9NUV9 329 aa12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 TUBA8Q9NY65 449 aaPredicted RBP12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 ZNF629Q9UEG4 869 aaPredicted RBP12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 ZNF223Q9UK11 482 aaPredicted RBP12.66□□□□□ -0.38
SHKBP1-218ENST00000598907 RNF223E7ERA6 249 aa12.65□□□□□ -0.38
SHKBP1-218ENST00000598907 C6orf47O95873 294 aa12.65□□□□□ -0.38
SHKBP1-218ENST00000598907 IL2RAP01589 272 aa12.65□□□□□ -0.38
SHKBP1-218ENST00000598907 ZCCHC18P0CG32 403 aa12.65□□□□□ -0.38
SHKBP1-218ENST00000598907 FPR1P21462 350 aa12.65□□□□□ -0.38
SHKBP1-218ENST00000598907 NTSP30990 170 aa12.65□□□□□ -0.38
SHKBP1-218ENST00000598907 CEACAM8P31997 349 aaPredicted RBP12.65□□□□□ -0.38
SHKBP1-218ENST00000598907 MPIP34949 423 aa12.65□□□□□ -0.38
SHKBP1-218ENST00000598907 TRPC1P48995 793 aa12.65□□□□□ -0.38
SHKBP1-218ENST00000598907 MANFP55145 182 aaKnown RBP12.65□□□□□ -0.38
SHKBP1-218ENST00000598907 HBA1P69905 142 aa12.65□□□□□ -0.38
SHKBP1-218ENST00000598907 SRSF2Q01130 221 aaKnown RBP12.65□□□□□ -0.38
SHKBP1-218ENST00000598907 MGAT2Q10469 447 aa12.65□□□□□ -0.38
SHKBP1-218ENST00000598907 STX4Q12846 297 aa12.65□□□□□ -0.38
SHKBP1-218ENST00000598907 BNIP1Q12981 228 aa12.65□□□□□ -0.38
SHKBP1-218ENST00000598907 TNK1Q13470 666 aa12.65□□□□□ -0.38
SHKBP1-218ENST00000598907 ACKR1Q16570 336 aa12.65□□□□□ -0.38
SHKBP1-218ENST00000598907 SPRED3Q2MJR0 410 aa12.65□□□□□ -0.38
SHKBP1-218ENST00000598907 CHRFAM7AQ494W8 412 aa12.65□□□□□ -0.38
SHKBP1-218ENST00000598907 LRIF1Q5T3J3 769 aa12.65□□□□□ -0.38
SHKBP1-218ENST00000598907 REP15Q6BDI9 236 aa12.65□□□□□ -0.38
SHKBP1-218ENST00000598907 DLEU7Q6UYE1 221 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms