RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 CD8B2A6NJW9 211 aa12.47□□□□□ -0.41
SCAF1-203ENST00000598359 DVL2O14641 736 aa12.47□□□□□ -0.41
SCAF1-203ENST00000598359 LYPLA1O75608 230 aaPredicted RBP12.47□□□□□ -0.41
SCAF1-203ENST00000598359 DCTN3O75935 186 aa12.47□□□□□ -0.41
SCAF1-203ENST00000598359 DNAJC8O75937 253 aaPredicted RBP12.47□□□□□ -0.41
SCAF1-203ENST00000598359 SLITRK5O94991 958 aa12.47□□□□□ -0.41
SCAF1-203ENST00000598359 FGF4P08620 206 aa12.47□□□□□ -0.41
SCAF1-203ENST00000598359 GCKP35557 465 aa12.47□□□□□ -0.41
SCAF1-203ENST00000598359 LHX2P50458 406 aa12.47□□□□□ -0.41
SCAF1-203ENST00000598359 MANFP55145 182 aaKnown RBP12.47□□□□□ -0.41
SCAF1-203ENST00000598359 B3GALT5-AS1P59052 145 aa12.47□□□□□ -0.41
SCAF1-203ENST00000598359 FOXF2Q12947 444 aa12.47□□□□□ -0.41
SCAF1-203ENST00000598359 PDE7AQ13946 482 aa12.47□□□□□ -0.41
SCAF1-203ENST00000598359 ZNHIT3Q15649 155 aaPredicted RBP12.47□□□□□ -0.41
SCAF1-203ENST00000598359 DECR1Q16698 335 aa12.47□□□□□ -0.41
SCAF1-203ENST00000598359 RNF165Q6ZSG1 346 aa12.47□□□□□ -0.41
SCAF1-203ENST00000598359 CDH24Q86UP0 819 aa12.47□□□□□ -0.41
SCAF1-203ENST00000598359 TMEM200AQ86VY9 491 aa12.47□□□□□ -0.41
SCAF1-203ENST00000598359 ZZZ3Q8IYH5 903 aa12.47□□□□□ -0.41
SCAF1-203ENST00000598359 OR2M3Q8NG83 312 aa12.47□□□□□ -0.41
SCAF1-203ENST00000598359 OR7A2PQ8NGA2 310 aa12.47□□□□□ -0.41
SCAF1-203ENST00000598359 OR5M1Q8NGP8 315 aa12.47□□□□□ -0.41
SCAF1-203ENST00000598359 OR6Y1Q8NGX8 325 aa12.47□□□□□ -0.41
SCAF1-203ENST00000598359 RMND5BQ96G75 393 aaPredicted RBP12.47□□□□□ -0.41
SCAF1-203ENST00000598359 YIPF4Q9BSR8 244 aa12.47□□□□□ -0.41
SCAF1-203ENST00000598359 LMF2Q9BU23 707 aaKnown RBP12.47□□□□□ -0.41
SCAF1-203ENST00000598359 ZNF395Q9H8N7 513 aaPredicted RBP12.47□□□□□ -0.41
SCAF1-203ENST00000598359 EML4Q9HC35 981 aaKnown RBP12.47□□□□□ -0.41
SCAF1-203ENST00000598359 KCNN3Q9UGI6 736 aa12.47□□□□□ -0.41
SCAF1-203ENST00000598359 SPG11Q96JI7 2443 aa12.47□□□□□ -0.41
SCAF1-203ENST00000598359 MBD3L4A6NDZ8 208 aaPredicted RBP12.46□□□□□ -0.41
SCAF1-203ENST00000598359 MBD3L3A6NE82 208 aaPredicted RBP12.46□□□□□ -0.41
SCAF1-203ENST00000598359 MBD3L5A6NJ08 208 aaPredicted RBP12.46□□□□□ -0.41
SCAF1-203ENST00000598359 CLCA1A8K7I4 914 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 SHISA8B8ZZ34 492 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 EEF1E1-BLOC1S5C9J1V9 151 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 EEF1E1O43324 174 aaKnown RBP12.46□□□□□ -0.41
SCAF1-203ENST00000598359 UTS2O95399 124 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 IL33O95760 270 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 ACP2P11117 423 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 PRPS2P11908 318 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 CPN1P15169 458 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 ASCL1P50553 236 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 DGKQP52824 942 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 PSPHP78330 225 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 MRPS22P82650 360 aaKnown RBP12.46□□□□□ -0.41
SCAF1-203ENST00000598359 BST1Q10588 318 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 BNIP1Q12981 228 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 RCAN2Q14206 197 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 GRAMD1BQ3KR37 738 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 XKR7Q5GH72 579 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 ENPP6Q6UWR7 440 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 APOOLQ6UXV4 268 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 ZAR1Q86SH2 424 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 NUDCD3Q8IVD9 361 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 UBQLNLQ8IYU4 475 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 GCNT2Q8N0V5 402 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 FADS6Q8N9I5 356 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 NUP43Q8NFH3 380 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 MBD3L2Q8NHZ7 208 aaPredicted RBP12.46□□□□□ -0.41
SCAF1-203ENST00000598359 ZPLD1Q8TCW7 415 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 GPR151Q8TDV0 419 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 DUSP19Q8WTR2 217 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 SLC9A6Q92581 669 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 C16orf58Q96GQ5 468 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 SIKE1Q9BRV8 207 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 CALHM2Q9HA72 323 aa12.46□□□□□ -0.41
SCAF1-203ENST00000598359 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 ANKRD65E5RJM6 399 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 H0YC42 278 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 SYT5O00445 386 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 ITM2AO43736 263 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 TBX19O60806 448 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 DIAPH2O60879 1101 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 UBOX5O94941 541 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 SERPINE1P05121 402 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 TMIGD3P0DMS9 266 aaPredicted RBP12.45□□□□□ -0.42
SCAF1-203ENST00000598359 HK1P19367 917 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 CTSSP25774 331 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 MAP3K8P41279 467 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 FRKP42685 505 aaPredicted RBP12.45□□□□□ -0.42
SCAF1-203ENST00000598359 TPD52P55327 224 aaPredicted RBP12.45□□□□□ -0.42
SCAF1-203ENST00000598359 DSCR4P56555 118 aaPredicted RBP12.45□□□□□ -0.42
SCAF1-203ENST00000598359 CLDN18P56856 261 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 PTGR1Q14914 329 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 SF3B4Q15427 424 aaKnown RBP eCLIP12.45□□□□□ -0.42
SCAF1-203ENST00000598359 CHI3L2Q15782 390 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 FAM91A1Q658Y4 838 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 AAGABQ6PD74 315 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 FIGNL1Q6PIW4 674 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 KRTCAP2Q8N6L1 136 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 FITM2Q8N6M3 262 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 SLC16A11Q8NCK7 471 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 ZFP28Q8NHY6 868 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 INTS12Q96CB8 462 aaKnown RBP12.45□□□□□ -0.42
SCAF1-203ENST00000598359 GIMAP5Q96F15 307 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 ZBED6CLQ96FA7 236 aaPredicted RBP12.45□□□□□ -0.42
SCAF1-203ENST00000598359 ZNF764Q96H86 408 aaPredicted RBP12.45□□□□□ -0.42
SCAF1-203ENST00000598359 PPP1R36Q96LQ0 422 aa12.45□□□□□ -0.42
SCAF1-203ENST00000598359 THAP1Q9NVV9 213 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms