RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 SPACA9Q96E40 222 aaPredicted RBP13.77□□□□□ -0.21
TRIM28-207ENST00000597136 RAB3IPQ96QF0 476 aaPredicted RBP13.77□□□□□ -0.21
TRIM28-207ENST00000597136 BTBD2Q9BX70 525 aa13.77□□□□□ -0.21
TRIM28-207ENST00000597136 PCDHAC1Q9H158 963 aa13.77□□□□□ -0.21
TRIM28-207ENST00000597136 EXD2Q9NVH0 621 aa13.77□□□□□ -0.21
TRIM28-207ENST00000597136 ASF1BQ9NVP2 202 aa13.77□□□□□ -0.21
TRIM28-207ENST00000597136 P2RX2Q9UBL9 471 aa13.77□□□□□ -0.21
TRIM28-207ENST00000597136 SUCOQ9UBS9 1254 aaKnown RBP13.77□□□□□ -0.21
TRIM28-207ENST00000597136 EGFL7Q9UHF1 273 aa13.77□□□□□ -0.21
TRIM28-207ENST00000597136 A0A0G2JMM0 328 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 A0A1W2PPB8 328 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 A0A1W2PRS3 328 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 FRG2CA6NGY1 282 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 KIR3DP1A8MWS1 328 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 PYCARD-AS1I3L0S3 204 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 NME2P1O60361 137 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 CCL3P10147 92 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 NR2F1P10589 423 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 CD46P15529 392 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 NME2P22392 152 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 PCGF2P35227 344 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 GPR85P60893 370 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 POU6F2P78424 691 aaPredicted RBP13.76□□□□□ -0.21
TRIM28-207ENST00000597136 CDK6Q00534 326 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 MS4A2Q01362 244 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 BNIP2Q12982 314 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 SCARB2Q14108 478 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 C16orf62Q7Z3J2 963 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.76□□□□□ -0.21
TRIM28-207ENST00000597136 SULF2Q8IWU5 870 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 TAGAPQ8N103 731 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 ANKFN1Q8N957 763 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 PSD4Q8NDX1 1056 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 FAM13CQ8NE31 585 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 CHDHQ8NE62 594 aaPredicted RBP13.76□□□□□ -0.21
TRIM28-207ENST00000597136 OR10G3Q8NGC4 313 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 NFKBIDQ8NI38 313 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 TMBIM1Q969X1 311 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 OMA1Q96E52 524 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 HSPBAP1Q96EW2 488 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 C5orf34Q96MH7 638 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 TRNT1Q96Q11 434 aaKnown RBP13.76□□□□□ -0.21
TRIM28-207ENST00000597136 Q9N2J8 555 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 LIPT1Q9Y234 373 aa13.76□□□□□ -0.21
TRIM28-207ENST00000597136 PINLYPA6NC86 204 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 TMEM247A6NEH6 219 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 CDK2AP1O14519 115 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 TO15178 435 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 GSTA4O15217 222 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 SLC28A2O43868 658 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 KCNK2O95069 426 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 BCHEP06276 602 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 GGT1P19440 569 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 RFC3P40938 356 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 TLE1Q04724 770 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 VEZF1Q14119 521 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 GNA13Q14344 377 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 NTRK2Q16620 822 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 ARHGAP11BQ3KRB8 267 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 CYP27C1Q4G0S4 372 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 DCST2Q5T1A1 773 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 BICRALQ6AI39 1079 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 REEP3Q6NUK4 255 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 RPUSD3Q6P087 351 aaKnown RBP13.75□□□□□ -0.21
TRIM28-207ENST00000597136 RTL4Q6ZR62 310 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 METTL25Q8N6Q8 603 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 GRHL3Q8TE85 626 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 ASB9Q96DX5 294 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 RMND5BQ96G75 393 aaPredicted RBP13.75□□□□□ -0.21
TRIM28-207ENST00000597136 TMEM19Q96HH6 336 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 PROK2Q9HC23 129 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 SH2D2AQ9NP31 389 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 CBLCQ9ULV8 474 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 POMPQ9Y244 141 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 OR10H1Q9Y4A9 318 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 PCDHGB6Q9Y5F9 930 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 SNX13Q9Y5W8 968 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 CHCHD2Q9Y6H1 151 aaPredicted RBP13.75□□□□□ -0.21
TRIM28-207ENST00000597136 C5orf58C9J3I9 102 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 CXCR6O00574 342 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 ACOT8O14734 319 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 ACOX3O15254 700 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 REM1O75628 298 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 PPM1BO75688 479 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 H6PDO95479 791 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 AK1P00568 194 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 CHRM4P08173 479 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 NCK1P16333 377 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 PIGAP37287 484 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 NRG3P56975 720 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 MRPS22P82650 360 aaKnown RBP13.75□□□□□ -0.21
TRIM28-207ENST00000597136 TRAP1Q12931 704 aaKnown RBP13.75□□□□□ -0.21
TRIM28-207ENST00000597136 IGFBP7Q16270 282 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 GPAT3Q53EU6 434 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 CCNJQ5T5M9 372 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 OLIG3Q7RTU3 272 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 SLC30A8Q8IWU4 369 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 GPALPP1Q8IXQ4 340 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 SLC34A3Q8N130 599 aa13.75□□□□□ -0.21
TRIM28-207ENST00000597136 BCORP1Q8N888 145 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms