RNA–Protein interactions for RNA: ENST00000596842.5

UPF1-204, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,825 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-204ENST00000596842 FGFBP1Q14512 234 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 C3orf38Q5JPI3 329 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 QSOX2Q6ZRP7 698 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 NUP43Q8NFH3 380 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 SENP5Q96HI0 755 aaPredicted RBP14.29□□□□□ -0.12
UPF1-204ENST00000596842 COQ10AQ96MF6 247 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 LRRC3BQ96PB8 259 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 ENAMQ9NRM1 1142 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 ZNF860A6NHJ4 632 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 KDM4BO94953 1096 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 EPCAMP16422 314 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 ENTPD8Q5MY95 495 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 MZT2AQ6P582 158 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 MORN4Q8NDC4 146 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 OR51L1Q8NGJ5 315 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 OR4Q3Q8NH05 313 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 CNRIP1Q96F85 164 aaPredicted RBP14.29□□□□□ -0.12
UPF1-204ENST00000596842 MSLNLQ96KJ4 702 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 NUDT15Q9NV35 164 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 BAIAP2Q9UQB8 552 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 SPEGQ15772 3267 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 A0A0B4J203 849 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 LANCL1O43813 399 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 LGI1O95970 557 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 PDGFAP04085 211 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 SOX9P48436 509 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 UBE3DQ7Z6J8 389 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 LINC01555Q8NAE3 123 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 ARID1AO14497 2285 aa14.29□□□□□ -0.12
UPF1-204ENST00000596842 A0A1W2PR48 441 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 J3QLW9 94 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 SAGP10523 405 aaPredicted RBP14.28□□□□□ -0.12
UPF1-204ENST00000596842 ZNF19P17023 458 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 ENPP1P22413 925 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 TAGLNQ01995 201 aaKnown RBP14.28□□□□□ -0.12
UPF1-204ENST00000596842 TRAM2Q15035 370 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 C1orf94Q6P1W5 598 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 ESPNLQ6ZVH7 1005 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 OR51A7Q8NH64 312 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 SUN3Q8TAQ9 357 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 ATF6BQ99941 703 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 SLA2Q9H6Q3 261 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 EXOSC1Q9Y3B2 195 aaKnown RBP14.28□□□□□ -0.12
UPF1-204ENST00000596842 GTPBP1O00178 669 aaKnown RBP14.28□□□□□ -0.12
UPF1-204ENST00000596842 CD3GP09693 182 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 CEBPBP17676 345 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 NOS3P29474 1203 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 ERP29P30040 261 aaKnown RBP14.28□□□□□ -0.12
UPF1-204ENST00000596842 BTN3A2P78410 334 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 CDK5Q00535 292 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 ST3GAL3Q11203 375 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 AKIRIN2Q53H80 203 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 ZNF628Q5EBL2 1059 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 TMEFF1Q8IYR6 380 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 IZUMO1Q8IYV9 350 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 ACOT4Q8N9L9 421 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 SUSD6Q92537 303 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 WDR34Q96EX3 536 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 CAPNS2Q96L46 248 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 OR7D2Q96RA2 312 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 ARHGAP9Q9BRR9 750 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 DPCDQ9BVM2 203 aaPredicted RBP14.28□□□□□ -0.12
UPF1-204ENST00000596842 MED28Q9H204 178 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 ADAP2Q9NPF8 381 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 HINT3Q9NQE9 182 aaKnown RBP14.28□□□□□ -0.12
UPF1-204ENST00000596842 TAS2R7Q9NYW3 318 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 SLC7A7Q9UM01 511 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 TCF20Q9UGU0 1960 aaKnown RBP14.28□□□□□ -0.12
UPF1-204ENST00000596842 THSD7BQ9C0I4 1608 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 DAPL1A0PJW8 107 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 SPINT1O43278 529 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 NARSO43776 548 aaKnown RBP14.28□□□□□ -0.12
UPF1-204ENST00000596842 ZNF780AO75290 641 aaPredicted RBP14.28□□□□□ -0.12
UPF1-204ENST00000596842 GSTM3P21266 225 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 CSNK1G2P78368 415 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 MAB21L1Q13394 359 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 DSG2Q14126 1118 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 NDUFA9Q16795 377 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 MINDY4Q4G0A6 757 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 YIF1BQ5BJH7 314 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 SPRED2Q7Z698 418 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 SIRT6Q8N6T7 355 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 SLC16A11Q8NCK7 471 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 GNPDA2Q8TDQ7 276 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 RFKQ969G6 155 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 ZNF514Q96K75 400 aaPredicted RBP14.28□□□□□ -0.12
UPF1-204ENST00000596842 DPEP2Q9H4A9 486 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 MRPS30Q9NP92 439 aaKnown RBP14.28□□□□□ -0.12
UPF1-204ENST00000596842 DEC1Q9P2X7 70 aa14.28□□□□□ -0.12
UPF1-204ENST00000596842 H3BSH0 61 aa14.27□□□□□ -0.12
UPF1-204ENST00000596842 FABP7O15540 132 aa14.27□□□□□ -0.12
UPF1-204ENST00000596842 FUT5Q11128 374 aa14.27□□□□□ -0.12
UPF1-204ENST00000596842 NOGQ13253 232 aa14.27□□□□□ -0.12
UPF1-204ENST00000596842 ADAM15Q13444 863 aa14.27□□□□□ -0.12
UPF1-204ENST00000596842 GALEQ14376 348 aa14.27□□□□□ -0.12
UPF1-204ENST00000596842 OR13C5Q8NGS8 318 aa14.27□□□□□ -0.12
UPF1-204ENST00000596842 OR8K3Q8NH51 312 aa14.27□□□□□ -0.12
UPF1-204ENST00000596842 SLC22A8Q8TCC7 542 aa14.27□□□□□ -0.12
UPF1-204ENST00000596842 RNF170Q96K19 258 aa14.27□□□□□ -0.12
UPF1-204ENST00000596842 ZBP1Q9H171 429 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms