RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 C19orf53Q9UNZ5 99 aaPredicted RBP9.49□□□□□ -0.89
CHMP2A-202ENST00000596708 EMC9Q9Y3B6 208 aa9.49□□□□□ -0.89
CHMP2A-202ENST00000596708 POLR3HQ9Y535 204 aaPredicted RBP9.49□□□□□ -0.89
CHMP2A-202ENST00000596708 AP4B1Q9Y6B7 739 aa9.49□□□□□ -0.89
CHMP2A-202ENST00000596708 CADP27708 2225 aa9.49□□□□□ -0.89
CHMP2A-202ENST00000596708 ABCA1O95477 2261 aa9.49□□□□□ -0.89
CHMP2A-202ENST00000596708 ALPK2Q86TB3 2170 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 INAFM1C9JVW0 142 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 GOLGA8RI6L899 631 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 UPK1AO00322 258 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 KCNH1O95259 989 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 UTS2O95399 124 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 ANGPTL1O95841 491 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 OPN1LWP04000 364 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 LOXP28300 417 aaPredicted RBP9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 PRKAA2P54646 552 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 LCP2Q13094 533 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 BEX5Q5H9J7 111 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 FAM71E1Q6IPT2 247 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 TIFABQ6ZNK6 161 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 WFDC8Q8IUA0 241 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 CCNYL1Q8N7R7 359 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 SLC9A6Q92581 669 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 CAVIN3Q969G5 261 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 ELP4Q96EB1 424 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 MARK4Q96L34 752 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 MDFIQ99750 246 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 GSX2Q9BZM3 304 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 FANCFQ9NPI8 374 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 PLSCR4Q9NRQ2 329 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 SIRT5Q9NXA8 310 aa9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 YLPM1P49750 1951 aaKnown RBP9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 NSD1Q96L73 2696 aaPredicted RBP9.48□□□□□ -0.89
CHMP2A-202ENST00000596708 GXYLT2A0PJZ3 443 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 SERTM1A2A2V5 107 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 TTC36A6NLP5 189 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 KLF4O43474 513 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 NDUFB5O43674 189 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 CRCPO75575 148 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 SYNGR4O95473 234 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 PLAUP00749 431 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 THBDP07204 575 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 PPP3CBP16298 524 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 GPC1P35052 558 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 SLC6A8P48029 635 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 FOXA1P55317 472 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 PRR5P85299 388 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 OCRLQ01968 901 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 GUSBP1Q15486 140 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 GRAMD1BQ3KR37 738 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 ALKBH2Q6NS38 261 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 APOOLQ6UXV4 268 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 ZNF704Q6ZNC4 412 aaPredicted RBP9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 GGNQ86UU5 652 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 WDR75Q8IWA0 830 aaKnown RBP9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 OR2L13Q8N349 312 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 MMGT1Q8N4V1 131 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 OR6K3Q8NGY3 331 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 GPR151Q8TDV0 419 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 PIK3R3Q92569 461 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 L3HYPDHQ96EM0 354 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 C11orf24Q96F05 449 aaPredicted RBP9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 PLPPR2Q96GM1 343 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 GMPPAQ96IJ6 420 aaPredicted RBP9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 AMDHD1Q96NU7 426 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 LMF2Q9BU23 707 aaKnown RBP9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 CXorf56Q9H5V9 222 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 MYNNQ9NPC7 610 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 EQTNQ9NQ60 294 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 PAQR5Q9NXK6 330 aaPredicted RBP9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 TAS2R7Q9NYW3 318 aa9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 MCTS1Q9ULC4 181 aaKnown RBP9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.47□□□□□ -0.89
CHMP2A-202ENST00000596708 CXCL13O43927 109 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 PSMG1O95456 288 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 GSTA1P08263 222 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 PRPS2P11908 318 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 IL11P20809 199 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 GCAP28676 217 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 PRKAG1P54619 331 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 NR1H2P55055 460 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 ATP5J2P56134 94 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 HSPB3Q12988 150 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 WHAMMP3Q1A5X7 153 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 CTU2Q2VPK5 515 aaKnown RBP9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 PDSS1Q5T2R2 415 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 STAC2Q6ZMT1 411 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 BEND4Q6ZU67 534 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 SH2D5Q6ZV89 423 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 ZNF551Q7Z340 670 aaPredicted RBP9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 SZRD1Q7Z422 152 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 GALNT10Q86SR1 603 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 STK32CQ86UX6 486 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 EXOC3L1Q86VI1 746 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 LCA5Q86VQ0 697 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 CEP112Q8N8E3 955 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 GATSQ8NAP1 163 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 OR10D3Q8NH80 312 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 ACTR6Q9GZN1 396 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms