RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 KIRREL2Q6UWL6 708 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 NPSR1Q6W5P4 371 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 C9orf40Q8IXQ3 194 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 ZNF619Q8N2I2 560 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 FAM86B1Q8N7N1 296 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 BCORP1Q8N888 145 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 OR4N2Q8NGD1 307 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 OR52P1PQ8NH57 321 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 M1APQ8TC57 530 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 PROX1Q92786 737 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 TP53INP1Q96A56 240 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 NACC2Q96BF6 587 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 HSPBAP1Q96EW2 488 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 BTBD9Q96Q07 612 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 MESP1Q9BRJ9 268 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 WWTR1Q9GZV5 400 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 SAP130Q9H0E3 1048 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 WDR70Q9NW82 654 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 C6orf203Q9P0P8 240 aaPredicted RBP12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 STOML1Q9UBI4 398 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 SLC13A4Q9UKG4 626 aa12.07□□□□□ -0.48
SHKBP1-209ENST00000595803 PEX12O00623 359 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 SOCS6O14544 535 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 PRKNO60260 465 aaPredicted RBP12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 REM1O75628 298 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 DBIP07108 87 aaKnown RBP12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 PABPC4LP0CB38 370 aaKnown RBP12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 COX6A1P12074 109 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 ICAM2P13598 275 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 IL7RP16871 459 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 F8A1P23610 371 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 KCNJ5P48544 419 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 CRYBA2P53672 197 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 SESN3P58005 492 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 PSPHP78330 225 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 LARS2Q15031 903 aaKnown RBP12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 DUSP7Q16829 419 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 FRRS1Q6ZNA5 592 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 PPP1R32Q7Z5V6 425 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 VTCN1Q7Z7D3 282 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 HMGN2P46Q86SG4 172 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 RAB43Q86YS6 212 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 ZDHHC21Q8IVQ6 265 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 PQLC1Q8N2U9 271 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 APCDD1LQ8NCL9 501 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 OR11G2Q8NGC1 345 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 OR8K3Q8NH51 312 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 NUBPLQ8TB37 319 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 LRTOMTQ8WZ04 291 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 IMMP1LQ96LU5 166 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 PKP2Q99959 881 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 PINK1Q9BXM7 581 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 DEFB126Q9BYW3 111 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 ZNF350Q9GZX5 532 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 HOXD1Q9GZZ0 328 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 NXF5Q9H1B4 397 aaKnown RBP12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 GPN2Q9H9Y4 310 aaPredicted RBP12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 ASCL3Q9NQ33 180 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 FBXO34Q9NWN3 711 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 SH3GLB1Q9Y371 365 aa12.06□□□□□ -0.48
SHKBP1-209ENST00000595803 K7ENP7 123 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 GNGT2O14610 69 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 TO15178 435 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 ACOX3O15254 700 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 DXOO77932 396 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 IL33O95760 270 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 HPP00738 406 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 LDLRP01130 860 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 IGKV1D-16P01601 117 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 FABP3P05413 133 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 FESP07332 822 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 LIPCP11150 499 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 CD247P20963 164 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 NRG3P56975 720 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 KCNJ10P78508 379 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 FLYWCH1Q4VC44 716 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 AP1ARQ63HQ0 302 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 PLAG1Q6DJT9 500 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 INO80CQ6PI98 192 aaPredicted RBP12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 AMIGO2Q86SJ2 522 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 DTX1Q86Y01 620 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 VRK2Q86Y07 508 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 TAGAPQ8N103 731 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 SLC34A3Q8N130 599 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 EXD3Q8N9H8 876 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 C17orf47Q8NEP4 570 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 GEMIN6Q8WXD5 167 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 TMBIM1Q969X1 311 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 ZG16BQ96DA0 208 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 ZNF354BQ96LW1 612 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 QRSL1Q9H0R6 528 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 ARMC7Q9H6L4 198 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 ZNF160Q9HCG1 818 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 IL1RAPQ9NPH3 570 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 KLHL28Q9NXS3 571 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 ZNF223Q9UK11 482 aaPredicted RBP12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 FAM32AQ9Y421 112 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 PCDHGA6Q9Y5G7 932 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 DSPPQ9NZW4 1301 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms