RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 SCAMP2O15127 329 aaKnown RBP21.21■□□□□ 0.99
LSM4-204ENST00000594828 HCRTR2O43614 444 aa21.21■□□□□ 0.99
LSM4-204ENST00000594828 TGM6O95932 706 aa21.21■□□□□ 0.99
LSM4-204ENST00000594828 ACP2P11117 423 aa21.21■□□□□ 0.99
LSM4-204ENST00000594828 EEFSECP57772 596 aaKnown RBP21.21■□□□□ 0.99
LSM4-204ENST00000594828 SORDQ00796 357 aa21.21■□□□□ 0.99
LSM4-204ENST00000594828 GLYR1Q49A26 553 aaPredicted RBP21.21■□□□□ 0.99
LSM4-204ENST00000594828 C6orf136Q5SQH8 315 aa21.21■□□□□ 0.99
LSM4-204ENST00000594828 MFSD12Q6NUT3 480 aa21.21■□□□□ 0.99
LSM4-204ENST00000594828 SPNS3Q6ZMD2 512 aa21.21■□□□□ 0.99
LSM4-204ENST00000594828 P4HA3Q7Z4N8 544 aa21.21■□□□□ 0.99
LSM4-204ENST00000594828 GALNT10Q86SR1 603 aa21.21■□□□□ 0.99
LSM4-204ENST00000594828 LUZP2Q86TE4 346 aa21.21■□□□□ 0.99
LSM4-204ENST00000594828 OR7A2PQ8NGA2 310 aa21.21■□□□□ 0.99
LSM4-204ENST00000594828 OR5M1Q8NGP8 315 aa21.21■□□□□ 0.99
LSM4-204ENST00000594828 OR6Y1Q8NGX8 325 aa21.21■□□□□ 0.99
LSM4-204ENST00000594828 LINC01560Q8TB33 94 aa21.21■□□□□ 0.99
LSM4-204ENST00000594828 FBXO30Q8TB52 745 aa21.21■□□□□ 0.99
LSM4-204ENST00000594828 C16orf58Q96GQ5 468 aa21.21■□□□□ 0.99
LSM4-204ENST00000594828 PIGQQ9BRB3 760 aa21.21■□□□□ 0.99
LSM4-204ENST00000594828 RBM24Q9BX46 236 aaKnown RBP21.21■□□□□ 0.99
LSM4-204ENST00000594828 IGLV3-32A0A0A0MS00 114 aa21.2■□□□□ 0.98
LSM4-204ENST00000594828 A0A1W2PRB8 838 aa21.2■□□□□ 0.98
LSM4-204ENST00000594828 OR2M5A3KFT3 312 aa21.2■□□□□ 0.98
LSM4-204ENST00000594828 SKAP2O75563 359 aaPredicted RBP21.2■□□□□ 0.98
LSM4-204ENST00000594828 KCNK2O95069 426 aa21.2■□□□□ 0.98
LSM4-204ENST00000594828 ALOX5P09917 674 aa21.2■□□□□ 0.98
LSM4-204ENST00000594828 EPXP11678 715 aa21.2■□□□□ 0.98
LSM4-204ENST00000594828 ETV4P43268 484 aa21.2■□□□□ 0.98
LSM4-204ENST00000594828 DAZAP2Q15038 168 aaPredicted RBP21.2■□□□□ 0.98
LSM4-204ENST00000594828 DUSP5Q16690 384 aa21.2■□□□□ 0.98
LSM4-204ENST00000594828 IL23RQ5VWK5 629 aa21.2■□□□□ 0.98
LSM4-204ENST00000594828 FIGNL1Q6PIW4 674 aa21.2■□□□□ 0.98
LSM4-204ENST00000594828 NUDCD3Q8IVD9 361 aa21.2■□□□□ 0.98
LSM4-204ENST00000594828 MREGQ8N565 214 aa21.2■□□□□ 0.98
LSM4-204ENST00000594828 FNDC5Q8NAU1 212 aa21.2■□□□□ 0.98
LSM4-204ENST00000594828 OR4C3Q8NH37 302 aa21.2■□□□□ 0.98
LSM4-204ENST00000594828 FAM110BQ8TC76 370 aa21.2■□□□□ 0.98
LSM4-204ENST00000594828 YIPF4Q9BSR8 244 aa21.2■□□□□ 0.98
LSM4-204ENST00000594828 C1orf50Q9BV19 199 aa21.2■□□□□ 0.98
LSM4-204ENST00000594828 PIGMQ9H3S5 423 aa21.2■□□□□ 0.98
LSM4-204ENST00000594828 HHATLQ9HCP6 504 aa21.2■□□□□ 0.98
LSM4-204ENST00000594828 SLC22A20A6NK97 555 aa21.19■□□□□ 0.98
LSM4-204ENST00000594828 ALG1L2C9J202 215 aa21.19■□□□□ 0.98
LSM4-204ENST00000594828 H3BML4 177 aa21.19■□□□□ 0.98
LSM4-204ENST00000594828 CTIFO43310 598 aaKnown RBP21.19■□□□□ 0.98
LSM4-204ENST00000594828 NDUFB5O43674 189 aa21.19■□□□□ 0.98
LSM4-204ENST00000594828 GMFGO60234 142 aa21.19■□□□□ 0.98
LSM4-204ENST00000594828 LYPLA1O75608 230 aaPredicted RBP21.19■□□□□ 0.98
LSM4-204ENST00000594828 LAMP1P11279 417 aa21.19■□□□□ 0.98
LSM4-204ENST00000594828 CPA2P48052 419 aa21.19■□□□□ 0.98
LSM4-204ENST00000594828 PRIM2P49643 509 aa21.19■□□□□ 0.98
LSM4-204ENST00000594828 SUCLG1P53597 346 aaKnown RBP21.19■□□□□ 0.98
LSM4-204ENST00000594828 CLDN15P56746 228 aa21.19■□□□□ 0.98
LSM4-204ENST00000594828 PTGR1Q14914 329 aa21.19■□□□□ 0.98
LSM4-204ENST00000594828 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.19■□□□□ 0.98
LSM4-204ENST00000594828 KRT71Q3SY84 523 aa21.19■□□□□ 0.98
LSM4-204ENST00000594828 CPTPQ5TA50 214 aa21.19■□□□□ 0.98
LSM4-204ENST00000594828 OR2A2Q6IF42 318 aa21.19■□□□□ 0.98
LSM4-204ENST00000594828 PPP1R14CQ8TAE6 165 aa21.19■□□□□ 0.98
LSM4-204ENST00000594828 FAM120BQ96EK7 910 aaKnown RBP21.19■□□□□ 0.98
LSM4-204ENST00000594828 PARD6BQ9BYG5 372 aa21.19■□□□□ 0.98
LSM4-204ENST00000594828 SIRT3Q9NTG7 399 aaPredicted RBP21.19■□□□□ 0.98
LSM4-204ENST00000594828 ZCCHC3Q9NUD5 404 aaKnown RBP21.19■□□□□ 0.98
LSM4-204ENST00000594828 ATAD3AQ9NVI7 634 aa21.19■□□□□ 0.98
LSM4-204ENST00000594828 SNX8Q9Y5X2 465 aa21.19■□□□□ 0.98
LSM4-204ENST00000594828 H0YC42 278 aa21.18■□□□□ 0.98
LSM4-204ENST00000594828 SEC14L5O43304 696 aa21.18■□□□□ 0.98
LSM4-204ENST00000594828 TNFRSF21O75509 655 aa21.18■□□□□ 0.98
LSM4-204ENST00000594828 OXSR1O95747 527 aaPredicted RBP21.18■□□□□ 0.98
LSM4-204ENST00000594828 NGFRP08138 427 aa21.18■□□□□ 0.98
LSM4-204ENST00000594828 TBXA2RP21731 343 aa21.18■□□□□ 0.98
LSM4-204ENST00000594828 SERPINB4P48594 390 aa21.18■□□□□ 0.98
LSM4-204ENST00000594828 DIO3P55073 304 aa21.18■□□□□ 0.98
LSM4-204ENST00000594828 TPD52P55327 224 aaPredicted RBP21.18■□□□□ 0.98
LSM4-204ENST00000594828 NATD1Q8N6N6 113 aa21.18■□□□□ 0.98
LSM4-204ENST00000594828 COX18Q8N8Q8 333 aa21.18■□□□□ 0.98
LSM4-204ENST00000594828 JADE3Q92613 823 aa21.18■□□□□ 0.98
LSM4-204ENST00000594828 TUBGCP3Q96CW5 907 aa21.18■□□□□ 0.98
LSM4-204ENST00000594828 PRPF18Q99633 342 aaKnown RBP21.18■□□□□ 0.98
LSM4-204ENST00000594828 GALNT8Q9NY28 637 aa21.18■□□□□ 0.98
LSM4-204ENST00000594828 PACSIN3Q9UKS6 424 aa21.18■□□□□ 0.98
LSM4-204ENST00000594828 ANKRD17O75179 2603 aaKnown RBP21.17■□□□□ 0.98
LSM4-204ENST00000594828 TNFSF12-TNFSF13A0A0A6YY99 330 aa21.17■□□□□ 0.98
LSM4-204ENST00000594828 A0A1W2PNV4 684 aa21.17■□□□□ 0.98
LSM4-204ENST00000594828 A8MXE2 369 aa21.17■□□□□ 0.98
LSM4-204ENST00000594828 RGS16O15492 202 aaPredicted RBP21.17■□□□□ 0.98
LSM4-204ENST00000594828 TNFSF13O75888 250 aa21.17■□□□□ 0.98
LSM4-204ENST00000594828 HMGN2P05204 90 aaKnown RBP21.17■□□□□ 0.98
LSM4-204ENST00000594828 CRHP06850 196 aa21.17■□□□□ 0.98
LSM4-204ENST00000594828 HPGDP15428 266 aa21.17■□□□□ 0.98
LSM4-204ENST00000594828 LCN1P31025 176 aa21.17■□□□□ 0.98
LSM4-204ENST00000594828 ART1P52961 327 aa21.17■□□□□ 0.98
LSM4-204ENST00000594828 IST1P53990 364 aa21.17■□□□□ 0.98
LSM4-204ENST00000594828 ZNF844Q08AG5 666 aa21.17■□□□□ 0.98
LSM4-204ENST00000594828 EXOSC6Q5RKV6 272 aaKnown RBP21.17■□□□□ 0.98
LSM4-204ENST00000594828 ZAR1Q86SH2 424 aa21.17■□□□□ 0.98
LSM4-204ENST00000594828 CDC20BQ86Y33 519 aa21.17■□□□□ 0.98
LSM4-204ENST00000594828 OR5P2Q8WZ92 322 aa21.17■□□□□ 0.98
LSM4-204ENST00000594828 OTUB1Q96FW1 271 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms