RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 RAET1LQ5VY80 246 aa12.56□□□□□ -0.4
APOC1-208ENST00000592535 FIGNL1Q6PIW4 674 aa12.56□□□□□ -0.4
APOC1-208ENST00000592535 ZAR1Q86SH2 424 aa12.56□□□□□ -0.4
APOC1-208ENST00000592535 OR5M1Q8NGP8 315 aa12.56□□□□□ -0.4
APOC1-208ENST00000592535 FAM110BQ8TC76 370 aa12.56□□□□□ -0.4
APOC1-208ENST00000592535 RNASE6Q93091 150 aaKnown RBP12.56□□□□□ -0.4
APOC1-208ENST00000592535 COQ8BQ96D53 544 aa12.56□□□□□ -0.4
APOC1-208ENST00000592535 KCNK9Q9NPC2 374 aa12.56□□□□□ -0.4
APOC1-208ENST00000592535 FBXO34Q9NWN3 711 aa12.56□□□□□ -0.4
APOC1-208ENST00000592535 CLCF1Q9UBD9 225 aa12.56□□□□□ -0.4
APOC1-208ENST00000592535 SNX8Q9Y5X2 465 aa12.56□□□□□ -0.4
APOC1-208ENST00000592535 GMFGO60234 142 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 KCNK2O95069 426 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 OXSR1O95747 527 aaPredicted RBP12.55□□□□□ -0.4
APOC1-208ENST00000592535 C6orf47O95873 294 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 IL18BPO95998 194 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 HMGN2P05204 90 aaKnown RBP12.55□□□□□ -0.4
APOC1-208ENST00000592535 G6PDP11413 515 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 CAPN3P20807 821 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 PRPS1L1P21108 318 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 BGNP21810 368 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 OPRM1P35372 400 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 DIO3P55073 304 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 EMX2Q04743 252 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 C17orf67Q0P5P2 114 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 MAD2L1Q13257 205 aaPredicted RBP12.55□□□□□ -0.4
APOC1-208ENST00000592535 GANABQ14697 944 aaKnown RBP12.55□□□□□ -0.4
APOC1-208ENST00000592535 LASP1Q14847 261 aaKnown RBP12.55□□□□□ -0.4
APOC1-208ENST00000592535 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.55□□□□□ -0.4
APOC1-208ENST00000592535 FBXL19-AS1Q494R0 122 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 CCNJQ5T5M9 372 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 ZCCHC12Q6PEW1 402 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 RIMKLAQ8IXN7 391 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 ZZZ3Q8IYH5 903 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 UBQLNLQ8IYU4 475 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 COX18Q8N8Q8 333 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 OR4C3Q8NH37 302 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 OR5P2Q8WZ92 322 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 JADE3Q92613 823 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 WNT2BQ93097 391 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 C1GALT1C1Q96EU7 318 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 PGM2Q96G03 612 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 UCN2Q96RP3 112 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 SORT1Q99523 831 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 CXorf36Q9H7Y0 433 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 PTGES2Q9H7Z7 377 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 SLC24A3Q9HC58 644 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 ATAD3AQ9NVI7 634 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 EIF3LQ9Y262 564 aaKnown RBP12.55□□□□□ -0.4
APOC1-208ENST00000592535 RAP2CQ9Y3L5 183 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 ACTL7BQ9Y614 415 aa12.55□□□□□ -0.4
APOC1-208ENST00000592535 POLQO75417 2590 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 MPDZO75970 2070 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 IGLV3-32A0A0A0MS00 114 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 OR2M5A3KFT3 312 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 EEF1E1-BLOC1S5C9J1V9 151 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 ALG1L2C9J202 215 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 EEF1E1O43324 174 aaKnown RBP12.54□□□□□ -0.4
APOC1-208ENST00000592535 HCRTR2O43614 444 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 RCBTB2O95199 551 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 ZWINTO95229 277 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 TUBBP07437 444 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 MYZAPP0CAP1 466 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 PEPDP12955 493 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 POU3F2P20265 443 aaPredicted RBP12.54□□□□□ -0.4
APOC1-208ENST00000592535 KIR2DL3P43628 341 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 SLC1A6P48664 564 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 CCT3P49368 545 aaKnown RBP12.54□□□□□ -0.4
APOC1-208ENST00000592535 CLDN15P56746 228 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 POU6F2P78424 691 aaPredicted RBP12.54□□□□□ -0.4
APOC1-208ENST00000592535 BCL2A1Q16548 175 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 TMEM200AQ86VY9 491 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 GRAMD2AQ8IUY3 354 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 GCNT2Q8N0V5 402 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 NATD1Q8N6N6 113 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 GATSQ8NAP1 163 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 PSMA8Q8TAA3 256 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 CDS1Q92903 461 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 INTS12Q96CB8 462 aaKnown RBP12.54□□□□□ -0.4
APOC1-208ENST00000592535 LRRC46Q96FV0 321 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 CHMP6Q96FZ7 201 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 ZFP3Q96NJ6 502 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 PRPF18Q99633 342 aaKnown RBP12.54□□□□□ -0.4
APOC1-208ENST00000592535 TM9SF2Q99805 663 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 DUSP26Q9BV47 211 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 BHLHE41Q9C0J9 482 aaPredicted RBP12.54□□□□□ -0.4
APOC1-208ENST00000592535 AKTIPQ9H8T0 292 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 ASIC5Q9NY37 505 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 NOP53Q9NZM5 478 aaKnown RBP12.54□□□□□ -0.4
APOC1-208ENST00000592535 CRIM1Q9NZV1 1036 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 JKAMPQ9P055 326 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 ITGB1BP2Q9UKP3 347 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.54□□□□□ -0.4
APOC1-208ENST00000592535 ZNF337Q9Y3M9 751 aa12.54□□□□□ -0.4
APOC1-208ENST00000592535 SHISA8B8ZZ34 492 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 H0YC42 278 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 H3BML4 177 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 NDUFB5O43674 189 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 TGM6O95932 706 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 NGFRP08138 427 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms