RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 ANGPTL1O95841 491 aa16.99■□□□□ 0.31
CCDC43-205ENST00000592333 CGAP01215 116 aa16.99■□□□□ 0.31
CCDC43-205ENST00000592333 CRYGSP22914 178 aa16.99■□□□□ 0.31
CCDC43-205ENST00000592333 GABRA3P34903 492 aa16.99■□□□□ 0.31
CCDC43-205ENST00000592333 CPOXP36551 454 aa16.99■□□□□ 0.31
CCDC43-205ENST00000592333 SUCLG1P53597 346 aaKnown RBP16.99■□□□□ 0.31
CCDC43-205ENST00000592333 GUSBP1Q15486 140 aa16.99■□□□□ 0.31
CCDC43-205ENST00000592333 BTLAQ7Z6A9 289 aa16.99■□□□□ 0.31
CCDC43-205ENST00000592333 MISPQ8IVT2 679 aa16.99■□□□□ 0.31
CCDC43-205ENST00000592333 UBQLNLQ8IYU4 475 aa16.99■□□□□ 0.31
CCDC43-205ENST00000592333 CNEP1R1Q8N9A8 125 aa16.99■□□□□ 0.31
CCDC43-205ENST00000592333 OR6Y1Q8NGX8 325 aa16.99■□□□□ 0.31
CCDC43-205ENST00000592333 ACTRT2Q8TDY3 377 aa16.99■□□□□ 0.31
CCDC43-205ENST00000592333 ZNF845Q96IR2 970 aaPredicted RBP16.99■□□□□ 0.31
CCDC43-205ENST00000592333 PINK1Q9BXM7 581 aa16.99■□□□□ 0.31
CCDC43-205ENST00000592333 LRTM1Q9HBL6 345 aa16.99■□□□□ 0.31
CCDC43-205ENST00000592333 C7orf72A4D263 438 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 C16orf97H3BN30 126 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 COPEO14579 308 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 PDPK1O15530 556 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 SOX30O94993 753 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 CHEK2O96017 543 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 IL11P20809 199 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 FPR1P21462 350 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 UGT2B10P36537 528 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 ASMTP46597 345 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 FAM27E3Q08E93 113 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.98■□□□□ 0.31
CCDC43-205ENST00000592333 VWA1Q6PCB0 445 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 ZNF474Q6S9Z5 364 aaPredicted RBP16.98■□□□□ 0.31
CCDC43-205ENST00000592333 PLXDC2Q6UX71 529 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 FAM214BQ7L5A3 538 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 MARCH3Q86UD3 253 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 FAM110BQ8TC76 370 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 FIG4Q92562 907 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 C18orf12Q96KH6 178 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 EGLN2Q96KS0 407 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 WFIKKN1Q96NZ8 548 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 RHOXF2Q9BQY4 288 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 RTN4RQ9BZR6 473 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 REEP4Q9H6H4 257 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 FANCFQ9NPI8 374 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 GLRX2Q9NS18 164 aa16.98■□□□□ 0.31
CCDC43-205ENST00000592333 A0A1W2PPR1 153 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 H3BML4 177 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 AZIN1O14977 448 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 FGF4P08620 206 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 POU2F1P14859 743 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 PPP3CBP16298 524 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 HOXB4P17483 251 aaPredicted RBP16.97■□□□□ 0.31
CCDC43-205ENST00000592333 TBXA2RP21731 343 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 GPC1P35052 558 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 SLC18A2Q05940 514 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 STX5Q13190 355 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 PDE7AQ13946 482 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 MLC1Q15049 377 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 PON3Q15166 354 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 LRIG3Q6UXM1 1119 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 Q6ZSR9 355 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 ZNF551Q7Z340 670 aaPredicted RBP16.97■□□□□ 0.31
CCDC43-205ENST00000592333 R3HCC1LQ7Z5L2 792 aaKnown RBP16.97■□□□□ 0.31
CCDC43-205ENST00000592333 CCDC63Q8NA47 563 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 FNDC9Q8TBE3 224 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 GPR151Q8TDV0 419 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 ZBTB8AQ96BR9 441 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 PPCDCQ96CD2 204 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 MS4A4EQ96PG1 132 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 FAM111AQ96PZ2 611 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 MED18Q9BUE0 208 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 PLSCR4Q9NRQ2 329 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 GIN1Q9NXP7 522 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 FLRT3Q9NZU0 649 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 PROCRQ9UNN8 238 aa16.97■□□□□ 0.31
CCDC43-205ENST00000592333 A0A1W2PQD3 144 aa16.96■□□□□ 0.31
CCDC43-205ENST00000592333 FAM171A2A8MVW0 826 aa16.96■□□□□ 0.31
CCDC43-205ENST00000592333 DEFB108AA8MXU0 73 aa16.96■□□□□ 0.31
CCDC43-205ENST00000592333 NDUFB5O43674 189 aa16.96■□□□□ 0.31
CCDC43-205ENST00000592333 TRIM13O60858 407 aa16.96■□□□□ 0.31
CCDC43-205ENST00000592333 DIAPH2O60879 1101 aa16.96■□□□□ 0.31
CCDC43-205ENST00000592333 RPL3P39023 403 aaKnown RBP16.96■□□□□ 0.31
CCDC43-205ENST00000592333 SERPINB4P48594 390 aa16.96■□□□□ 0.31
CCDC43-205ENST00000592333 MANFP55145 182 aaKnown RBP16.96■□□□□ 0.31
CCDC43-205ENST00000592333 CLDN20P56880 219 aa16.96■□□□□ 0.31
CCDC43-205ENST00000592333 NKX6-1P78426 367 aaPredicted RBP16.96■□□□□ 0.31
CCDC43-205ENST00000592333 HSPB3Q12988 150 aa16.96■□□□□ 0.31
CCDC43-205ENST00000592333 POU4F3Q15319 338 aa16.96■□□□□ 0.31
CCDC43-205ENST00000592333 SGCBQ16585 318 aa16.96■□□□□ 0.31
CCDC43-205ENST00000592333 GRAMD1BQ3KR37 738 aa16.96■□□□□ 0.31
CCDC43-205ENST00000592333 PRSS57Q6UWY2 283 aa16.96■□□□□ 0.31
CCDC43-205ENST00000592333 CXorf67Q86X51 503 aaPredicted RBP16.96■□□□□ 0.31
CCDC43-205ENST00000592333 WDR75Q8IWA0 830 aaKnown RBP16.96■□□□□ 0.31
CCDC43-205ENST00000592333 GTPBP8Q8N3Z3 284 aaPredicted RBP16.96■□□□□ 0.31
CCDC43-205ENST00000592333 NATD1Q8N6N6 113 aa16.96■□□□□ 0.31
CCDC43-205ENST00000592333 WFDC11Q8NEX6 87 aa16.96■□□□□ 0.31
CCDC43-205ENST00000592333 TNFRSF12AQ9NP84 129 aa16.96■□□□□ 0.31
CCDC43-205ENST00000592333 UBQLN4Q9NRR5 601 aa16.96■□□□□ 0.31
CCDC43-205ENST00000592333 MKS1Q9NXB0 559 aa16.96■□□□□ 0.31
CCDC43-205ENST00000592333 EMC9Q9Y3B6 208 aa16.96■□□□□ 0.31
CCDC43-205ENST00000592333 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.95■□□□□ 0.3
CCDC43-205ENST00000592333 C17orf51A8MQB3 221 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms