RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 KCNH1O95259 989 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 TGDSO95455 350 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 OXSR1O95747 527 aaPredicted RBP10.48□□□□□ -0.73
VMP1-211ENST00000591315 MATN1P21941 496 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 STARP49675 285 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 SNTA1Q13424 505 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 GSTA3Q16772 222 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 NDUFAF6Q330K2 333 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 VPS26BQ4G0F5 336 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 TIGD2Q4W5G0 525 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 COX20Q5RI15 118 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 RTL6Q6ICC9 239 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 CGB2Q6NT52 195 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 ZNF585AQ6P3V2 769 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 TNFAIP8L2Q6P589 184 aaPredicted RBP10.48□□□□□ -0.73
VMP1-211ENST00000591315 ZCCHC12Q6PEW1 402 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 PLXDC2Q6UX71 529 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 HMGN2P46Q86SG4 172 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 MIER2Q8N344 545 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 OR2M3Q8NG83 312 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 OR5M1Q8NGP8 315 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 PNPT1Q8TCS8 783 aaKnown RBP10.48□□□□□ -0.73
VMP1-211ENST00000591315 ADAMTS15Q8TE58 950 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 ITLN2Q8WWU7 325 aaPredicted RBP10.48□□□□□ -0.73
VMP1-211ENST00000591315 ARSGQ96EG1 525 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 SLC35G5Q96KT7 338 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 DMRTA2Q96SC8 542 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 STACQ99469 402 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 ZBTB18Q99592 522 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 CCDC28BQ9BUN5 200 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 OR51I1Q9H343 314 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 NEUROD4Q9HD90 331 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 DUSP22Q9NRW4 184 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 ALKBH4Q9NXW9 302 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 ZIM2Q9NZV7 527 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 PPP4R1LQ9P1A2 415 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 B4GALT7Q9UBV7 327 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 BTNL2Q9UIR0 455 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 ACAD8Q9UKU7 415 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 PCDHGB4Q9UN71 923 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 FAF1Q9UNN5 650 aaPredicted RBP10.48□□□□□ -0.73
VMP1-211ENST00000591315 NBPF19A0A087WUL8 3843 aa10.48□□□□□ -0.73
VMP1-211ENST00000591315 INTS1Q8N201 2190 aaKnown RBP10.48□□□□□ -0.73
VMP1-211ENST00000591315 UNC79Q9P2D8 2635 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 ARHGAP21Q5T5U3 1957 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 SUSD5O60279 629 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 FCMRO60667 390 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 HCN1O60741 890 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 ANGPTL1O95841 491 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 OR12D1P0DN82 309 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 ESRRAP11474 423 aaPredicted RBP10.47□□□□□ -0.73
VMP1-211ENST00000591315 BMP7P18075 431 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 UQCRC2P22695 453 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 ELAVL4P26378 380 aaKnown RBP10.47□□□□□ -0.73
VMP1-211ENST00000591315 POLR2JP52435 117 aaKnown RBP10.47□□□□□ -0.73
VMP1-211ENST00000591315 CASP6P55212 293 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 PSPHP78330 225 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 CRYZQ08257 329 aaKnown RBP10.47□□□□□ -0.73
VMP1-211ENST00000591315 FUT5Q11128 374 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 CD226Q15762 336 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.47□□□□□ -0.73
VMP1-211ENST00000591315 DPY19L1Q2PZI1 675 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.47□□□□□ -0.732e-7■■■■■ 32.6
VMP1-211ENST00000591315 DCST2Q5T1A1 773 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.47□□□□□ -0.73
VMP1-211ENST00000591315 SAXO2Q658L1 398 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 SLC2A7Q6PXP3 512 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 ZNF621Q6ZSS3 439 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 RNF130Q86XS8 419 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 FADS6Q8N9I5 356 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 OR4K17Q8NGC6 315 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 GOT1L1Q8NHS2 421 aaPredicted RBP10.47□□□□□ -0.73
VMP1-211ENST00000591315 MOAP1Q96BY2 351 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 AURKBQ96GD4 344 aaPredicted RBP10.47□□□□□ -0.73
VMP1-211ENST00000591315 PANX1Q96RD7 426 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 SDF2Q99470 211 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 TIMP4Q99727 224 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 NPAS1Q99742 590 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 SLC35A5Q9BS91 424 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 UGT2B28Q9BY64 529 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 OR2B2Q9GZK3 357 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 FGFR1OP2Q9NVK5 253 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 QPCTLQ9NXS2 382 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 KCNE5Q9UJ90 142 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 RPH3AQ9Y2J0 694 aaPredicted RBP10.47□□□□□ -0.73
VMP1-211ENST00000591315 FAM215AQ9Y5M1 114 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 CACNA1DQ01668 2161 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 NOTCH2Q04721 2471 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 ITPR2Q14571 2701 aa10.47□□□□□ -0.73
VMP1-211ENST00000591315 A0A0G2JND7 137 aa10.46□□□□□ -0.73
VMP1-211ENST00000591315 FAM234BA2RU67 622 aa10.46□□□□□ -0.73
VMP1-211ENST00000591315 NPIPB9F8W1W9 429 aa10.46□□□□□ -0.73
VMP1-211ENST00000591315 CBR3O75828 277 aa10.46□□□□□ -0.73
VMP1-211ENST00000591315 TBXA2RP21731 343 aa10.46□□□□□ -0.73
VMP1-211ENST00000591315 DPP4P27487 766 aa10.46□□□□□ -0.73
VMP1-211ENST00000591315 CHI3L1P36222 383 aaPredicted RBP10.46□□□□□ -0.73
VMP1-211ENST00000591315 NUP107P57740 925 aa10.46□□□□□ -0.73
VMP1-211ENST00000591315 B3GALT5-AS1P59052 145 aa10.46□□□□□ -0.73
VMP1-211ENST00000591315 VASNQ6EMK4 673 aa10.46□□□□□ -0.73
VMP1-211ENST00000591315 ARSKQ6UWY0 536 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms