RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 TAS2R41P59536 307 aa12.02□□□□□ -0.49
PTBP1-216ENST00000590887 COL9A2Q14055 689 aaPredicted RBP12.02□□□□□ -0.49
PTBP1-216ENST00000590887 EFR3AQ14156 821 aa12.02□□□□□ -0.49
PTBP1-216ENST00000590887 EBPQ15125 230 aaKnown RBP12.02□□□□□ -0.49
PTBP1-216ENST00000590887 ZNF141Q15928 474 aa12.02□□□□□ -0.49
PTBP1-216ENST00000590887 C3orf38Q5JPI3 329 aa12.02□□□□□ -0.49
PTBP1-216ENST00000590887 DCST1Q5T197 706 aa12.02□□□□□ -0.49
PTBP1-216ENST00000590887 CCNJQ5T5M9 372 aa12.02□□□□□ -0.49
PTBP1-216ENST00000590887 DEF8Q6ZN54 512 aa12.02□□□□□ -0.49
PTBP1-216ENST00000590887 SHISA6Q6ZSJ9 500 aa12.02□□□□□ -0.49
PTBP1-216ENST00000590887 GRAMD2AQ8IUY3 354 aa12.02□□□□□ -0.49
PTBP1-216ENST00000590887 NLGN4XQ8N0W4 816 aa12.02□□□□□ -0.49
PTBP1-216ENST00000590887 DHRSXQ8N5I4 330 aa12.02□□□□□ -0.49
PTBP1-216ENST00000590887 ATG16L2Q8NAA4 619 aa12.02□□□□□ -0.49
PTBP1-216ENST00000590887 SIMC1Q8NDZ2 872 aa12.02□□□□□ -0.49
PTBP1-216ENST00000590887 NLGN4YQ8NFZ3 816 aaPredicted RBP12.02□□□□□ -0.49
PTBP1-216ENST00000590887 GPR32P1Q8NGA4 272 aa12.02□□□□□ -0.49
PTBP1-216ENST00000590887 VANGL1Q8TAA9 524 aaPredicted RBP12.02□□□□□ -0.49
PTBP1-216ENST00000590887 ADIPOR1Q96A54 375 aa12.02□□□□□ -0.49
PTBP1-216ENST00000590887 PRRC1Q96M27 445 aa12.02□□□□□ -0.49
PTBP1-216ENST00000590887 WWTR1Q9GZV5 400 aa12.02□□□□□ -0.49
PTBP1-216ENST00000590887 TMEM27Q9HBJ8 222 aa12.02□□□□□ -0.49
PTBP1-216ENST00000590887 SELENONQ9NZV5 590 aa12.02□□□□□ -0.49
PTBP1-216ENST00000590887 PDP1Q9P0J1 537 aaPredicted RBP12.02□□□□□ -0.49
PTBP1-216ENST00000590887 KCND3Q9UK17 655 aa12.02□□□□□ -0.49
PTBP1-216ENST00000590887 FARSAQ9Y285 508 aaKnown RBP12.02□□□□□ -0.49
PTBP1-216ENST00000590887 TESMINQ9Y4I5 508 aa12.02□□□□□ -0.49
PTBP1-216ENST00000590887 TMEM229AB2RXF0 380 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 H0YAE9 185 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 PDLIM1O00151 329 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 FAAHO00519 579 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 SOCS2O14508 198 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 EI24O14681 340 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 DENRO43583 198 aaKnown RBP12.01□□□□□ -0.49
PTBP1-216ENST00000590887 REM1O75628 298 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 CLPSP04118 112 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 THRBP10828 461 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 MMP11P24347 488 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 ETV5P41161 510 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 NR0B1P51843 470 aaKnown RBP12.01□□□□□ -0.49
PTBP1-216ENST00000590887 RNF4P78317 190 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 PUM1Q14671 1186 aaKnown RBP eCLIP12.01□□□□□ -0.491e-6■■■■□ 22
PTBP1-216ENST00000590887 MICAQ29983 383 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 FAM198BQ6UWH4 519 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 LANCL3Q6ZV70 420 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 VRK2Q86Y07 508 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 SHISA5Q8N114 240 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 SLC15A4Q8N697 577 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 M1APQ8TC57 530 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 SLC22A8Q8TCC7 542 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 DIO2Q92813 273 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 SLC38A4Q969I6 547 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 IP6K3Q96PC2 410 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 ALPK1Q96QP1 1244 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 NR1H4Q96RI1 486 aaPredicted RBP12.01□□□□□ -0.49
PTBP1-216ENST00000590887 ZNF559Q9BR84 538 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 DEFB126Q9BYW3 111 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 POLR1BQ9H9Y6 1135 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 TESQ9UGI8 421 aaKnown RBP12.01□□□□□ -0.49
PTBP1-216ENST00000590887 LYVE1Q9Y5Y7 322 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 U3KQV3 271 aa12.01□□□□□ -0.49
PTBP1-216ENST00000590887 COL27A1Q8IZC6 1860 aaPredicted RBP12.01□□□□□ -0.49
PTBP1-216ENST00000590887 FER1L5A0AVI2 2057 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 CDHR4A6H8M9 788 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 PCNX2A6NKB5 2137 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 STMND1H3BQB6 276 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 UGT2B11O75310 529 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 TNFSF15O95150 251 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 OR5F1O95221 314 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 ADH7P40394 386 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 GPR143P51810 404 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 SLC26A5P58743 744 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 COPZ1P61923 177 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 EEF1A1P68104 462 aaKnown RBP12□□□□□ -0.49
PTBP1-216ENST00000590887 RPP38P78345 283 aaKnown RBP12□□□□□ -0.49
PTBP1-216ENST00000590887 PLCXD2Q0VAA5 305 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 MERTKQ12866 999 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 FGFBP1Q14512 234 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 TRAM2Q15035 370 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 IQCCQ4KMZ1 466 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 TCTN3Q6NUS6 607 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 NPSR1Q6W5P4 371 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 ZNF836Q6ZNA1 936 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 PLEKHM3Q6ZWE6 761 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 NDUFAF7Q7L592 441 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 SLCO6A1Q86UG4 719 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 RAB43Q86YS6 212 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 EPHX4Q8IUS5 362 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 MISPQ8IVT2 679 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 DND1Q8IYX4 353 aaKnown RBP12□□□□□ -0.49
PTBP1-216ENST00000590887 ZNF614Q8N883 585 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 NFAM1Q8NET5 270 aaPredicted RBP12□□□□□ -0.49
PTBP1-216ENST00000590887 APOBEC4Q8WW27 367 aaKnown RBP12□□□□□ -0.49
PTBP1-216ENST00000590887 TMCO6Q96DC7 493 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 MCHR1Q99705 422 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 SLC29A1Q99808 456 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 PSD2Q9BQI7 771 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 TRIM2Q9C040 744 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 ZNF700Q9H0M5 742 aa12□□□□□ -0.49
PTBP1-216ENST00000590887 NXF5Q9H1B4 397 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms