RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 SGCBQ16585 318 aa16.16■□□□□ 0.18
PRKCSH-211ENST00000590098 CLEC6AQ6EIG7 209 aa16.16■□□□□ 0.18
PRKCSH-211ENST00000590098 SH2D5Q6ZV89 423 aa16.16■□□□□ 0.18
PRKCSH-211ENST00000590098 CEP70Q8NHQ1 597 aa16.16■□□□□ 0.18
PRKCSH-211ENST00000590098 FNDC9Q8TBE3 224 aa16.16■□□□□ 0.18
PRKCSH-211ENST00000590098 UBLCP1Q8WVY7 318 aaPredicted RBP16.16■□□□□ 0.18
PRKCSH-211ENST00000590098 PIK3R3Q92569 461 aa16.16■□□□□ 0.18
PRKCSH-211ENST00000590098 RNF122Q9H9V4 155 aa16.16■□□□□ 0.18
PRKCSH-211ENST00000590098 HHATLQ9HCP6 504 aa16.16■□□□□ 0.18
PRKCSH-211ENST00000590098 TNFRSF12AQ9NP84 129 aa16.16■□□□□ 0.18
PRKCSH-211ENST00000590098 C6orf203Q9P0P8 240 aaPredicted RBP16.16■□□□□ 0.18
PRKCSH-211ENST00000590098 CCL27Q9Y4X3 112 aa16.16■□□□□ 0.18
PRKCSH-211ENST00000590098 ARID1AO14497 2285 aa16.16■□□□□ 0.18
PRKCSH-211ENST00000590098 UQCRHLA0A096LP55 91 aa16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 IGLV3-32A0A0A0MS00 114 aa16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 GXYLT2A0PJZ3 443 aa16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 SMIM23A6NLE4 172 aa16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 C16orf97H3BN30 126 aa16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 CTIFO43310 598 aaKnown RBP16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 SHBGP04278 402 aa16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 FCGR2AP12318 317 aa16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 UGT2B10P36537 528 aa16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 PRKAG1P54619 331 aa16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 NKX6-1P78426 367 aaPredicted RBP16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 OCRLQ01968 901 aa16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 GRAMD1BQ3KR37 738 aa16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 LIPMQ5VYY2 423 aa16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 ANKRD26P1Q6NSI1 321 aa16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 ZNF474Q6S9Z5 364 aaPredicted RBP16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 SZRD1Q7Z422 152 aa16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 GSPT2Q8IYD1 628 aaKnown RBP16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 CIDECQ96AQ7 238 aaPredicted RBP16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 PPCDCQ96CD2 204 aa16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 ZBED6CLQ96FA7 236 aaPredicted RBP16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 PRRG4Q9BZD6 226 aa16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 PPCSQ9HAB8 311 aa16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 SH3BP4Q9P0V3 963 aa16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 PROCRQ9UNN8 238 aa16.15■□□□□ 0.18
PRKCSH-211ENST00000590098 NPIPB8E9PQR5 432 aa16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 AZIN1O14977 448 aa16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 ARHGEF9O43307 516 aa16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 AKAP10O43572 662 aa16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 CHEK2O96017 543 aa16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 CD8BP10966 210 aa16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 NEFHP12036 1026 aa16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 MANFP55145 182 aaKnown RBP16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 SHEQ5VZ18 495 aa16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 PPP4R4Q6NUP7 873 aa16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 APOOLQ6UXV4 268 aa16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 BIVMQ86UB2 503 aa16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 EXOC3L1Q86VI1 746 aa16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 CDRT4Q8N9R6 151 aa16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 ZNF610Q8N9Z0 462 aa16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 NUP43Q8NFH3 380 aa16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 SLC9A6Q92581 669 aa16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 PIK3IP1Q96FE7 263 aa16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 ZNF764Q96H86 408 aaPredicted RBP16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 CCT7Q99832 543 aa16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 C12orf65Q9H3J6 166 aaKnown RBP16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 REEP4Q9H6H4 257 aa16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 MID2Q9UJV3 735 aa16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 VDAC3Q9Y277 283 aa16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 FIS1Q9Y3D6 152 aa16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 PTGDR2Q9Y5Y4 395 aa16.14■□□□□ 0.17
PRKCSH-211ENST00000590098 A0A087WZY1 265 aa16.13■□□□□ 0.17
PRKCSH-211ENST00000590098 NDUFB5O43674 189 aa16.13■□□□□ 0.17
PRKCSH-211ENST00000590098 NKX2-2O95096 273 aa16.13■□□□□ 0.17
PRKCSH-211ENST00000590098 CGAP01215 116 aa16.13■□□□□ 0.17
PRKCSH-211ENST00000590098 IGKV1D-16P01601 117 aa16.13■□□□□ 0.17
PRKCSH-211ENST00000590098 KRT4P19013 534 aa16.13■□□□□ 0.17
PRKCSH-211ENST00000590098 CRYGSP22914 178 aa16.13■□□□□ 0.17
PRKCSH-211ENST00000590098 ADSLP30566 484 aaPredicted RBP16.13■□□□□ 0.17
PRKCSH-211ENST00000590098 EIF1AXP47813 144 aaKnown RBP16.13■□□□□ 0.17
PRKCSH-211ENST00000590098 FAM214BQ7L5A3 538 aa16.13■□□□□ 0.17
PRKCSH-211ENST00000590098 TDRPQ86YL5 185 aa16.13■□□□□ 0.17
PRKCSH-211ENST00000590098 C10orf107Q8IVU9 208 aa16.13■□□□□ 0.17
PRKCSH-211ENST00000590098 HOMEZQ8IX15 550 aa16.13■□□□□ 0.17
PRKCSH-211ENST00000590098 METTL25Q8N6Q8 603 aa16.13■□□□□ 0.17
PRKCSH-211ENST00000590098 PIGTQ969N2 578 aa16.13■□□□□ 0.17
PRKCSH-211ENST00000590098 C18orf12Q96KH6 178 aa16.13■□□□□ 0.17
PRKCSH-211ENST00000590098 TSSK3Q96PN8 268 aa16.13■□□□□ 0.17
PRKCSH-211ENST00000590098 TRMOQ9BU70 441 aa16.13■□□□□ 0.17
PRKCSH-211ENST00000590098 EMC9Q9Y3B6 208 aa16.13■□□□□ 0.17
PRKCSH-211ENST00000590098 NSD1Q96L73 2696 aaPredicted RBP16.13■□□□□ 0.17
PRKCSH-211ENST00000590098 DEFB108AA8MXU0 73 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 SHISA8B8ZZ34 492 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 ALG1L2C9J202 215 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 EIF1AYO14602 144 aaKnown RBP16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 TBX19O60806 448 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 SMPD2O60906 423 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 PLGP00747 810 aaPredicted RBP16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 HPGDP15428 266 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 ZNF17P17021 662 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 DDX5P17844 614 aaKnown RBP16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 SDC1P18827 310 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 FPR1P21462 350 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 TBXA2RP21731 343 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 MAP3K8P41279 467 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 TMEM44Q2T9K0 475 aa16.12■□□□□ 0.17
PRKCSH-211ENST00000590098 Q6ZSR9 355 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms