RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 GABARAPL2P60520 117 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 DMPKQ09013 629 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 DSG2Q14126 1118 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 ALG11Q2TAA5 492 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 PAQR6Q6TCH4 344 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 NKAIN4Q8IVV8 208 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 DNAJC22Q8N4W6 341 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 OR13F1Q8NGS4 319 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 OR6N2Q8NGY6 317 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 KCNN2Q9H2S1 579 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 ALKBH4Q9NXW9 302 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 ASIC5Q9NY37 505 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 SCML1Q9UN30 329 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 PCDHGA6Q9Y5G7 932 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 KCNE1BA0A087WTH5 132 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 TRAPPC13A5PLN9 417 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 NOS1APO75052 506 aaPredicted RBP13.65□□□□□ -0.22
RETREG3-208ENST00000589797 CDK1P06493 297 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 DCNP07585 359 aaKnown RBP13.65□□□□□ -0.22
RETREG3-208ENST00000589797 COL9A1P20849 921 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 MAOAP21397 527 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 CD6P30203 668 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 TNFRSF4P43489 277 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 RGS6P49758 472 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 TUBA1BP68363 451 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 TCTN3Q6NUS6 607 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 TUBA1AQ71U36 451 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 YIPF7Q8N8F6 280 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 CDRT4Q8N9R6 151 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 ZNF527Q8NB42 609 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 ATOH1Q92858 354 aaPredicted RBP13.65□□□□□ -0.22
RETREG3-208ENST00000589797 SHDQ96IW2 340 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.65□□□□□ -0.22
RETREG3-208ENST00000589797 PEX12O00623 359 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 ST6GAL1P15907 406 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 CD83Q01151 205 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 TMEM151BQ8IW70 566 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 TMEM255BQ8WV15 326 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 ELSPBP1Q96BH3 223 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 NELL2Q99435 816 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 POLDIP3Q9BY77 421 aaKnown RBP13.65□□□□□ -0.22
RETREG3-208ENST00000589797 KIR3DX1Q9H7L2 352 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 ATP13A2Q9NQ11 1180 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 SLAMF7Q9NQ25 335 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 NANSQ9NR45 359 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 SEC14L4Q9UDX3 406 aa13.65□□□□□ -0.22
RETREG3-208ENST00000589797 MED12Q93074 2177 aa13.65□□□□□ -0.23
RETREG3-208ENST00000589797 ITIH1P19827 911 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 MMP11P24347 488 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 PKLRP30613 574 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 GBX2P52951 348 aaPredicted RBP13.64□□□□□ -0.23
RETREG3-208ENST00000589797 OR2B6P58173 313 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 DUSP5Q16690 384 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 ADPRMQ3LIE5 342 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 SLC48A1Q6P1K1 146 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 CEACAM19Q7Z692 300 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 SDR16C5Q8N3Y7 309 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 SLC44A3Q8N4M1 653 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 LINC00471Q8N535 108 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 SAMD12Q8N8I0 201 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 SCAIQ8N9R8 606 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 NAXEQ8NCW5 288 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 MOSPD2Q8NHP6 518 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 TMEM239Q8WW34 195 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 HRASLS5Q96KN8 279 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 MMP27Q9H306 513 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 SACM1LQ9NTJ5 587 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 CACNA1HO95180 2353 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 DBIP07108 87 aaKnown RBP13.64□□□□□ -0.23
RETREG3-208ENST00000589797 ELAVL4P26378 380 aaKnown RBP13.64□□□□□ -0.23
RETREG3-208ENST00000589797 OMPP47874 163 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 KCNJ5P48544 419 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 E2F2Q14209 437 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 PLEKHG7Q6ZR37 379 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 PRSS41Q7RTY9 318 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 TCF7L1Q9HCS4 588 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 TRIM36Q9NQ86 728 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 ZC4H2Q9NQZ6 224 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 HSPE1-MOB4S4R3N1 261 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 AGAP14A8MT82 685 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 RNF13O43567 381 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 HK1P19367 917 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 SLC6A6P31641 620 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 MRPS21P82921 87 aaKnown RBP13.64□□□□□ -0.23
RETREG3-208ENST00000589797 C1orf53Q5VUE5 145 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 ZNF793Q6ZN11 406 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 MFSD9Q8NBP5 474 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 OR13C2Q8NGS9 318 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 SMAP2Q8WU79 429 aaPredicted RBP13.64□□□□□ -0.23
RETREG3-208ENST00000589797 TAPBPLQ9BX59 468 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 HCN2Q9UL51 889 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 IER3IP1Q9Y5U9 82 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 LOC285556D6RIA3 1793 aa13.64□□□□□ -0.23
RETREG3-208ENST00000589797 GPR89AB7ZAQ6 455 aa13.63□□□□□ -0.23
RETREG3-208ENST00000589797 SMAD9O15198 467 aaKnown RBP13.63□□□□□ -0.23
RETREG3-208ENST00000589797 GPR89BP0CG08 455 aa13.63□□□□□ -0.23
RETREG3-208ENST00000589797 GIMD1P0DJR0 217 aa13.63□□□□□ -0.23
RETREG3-208ENST00000589797 ITGAMP11215 1152 aa13.63□□□□□ -0.23
RETREG3-208ENST00000589797 MLF2Q15773 248 aaPredicted RBP13.63□□□□□ -0.23
RETREG3-208ENST00000589797 TMEM92Q6UXU6 159 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms