RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 ZFP28Q8NHY6 868 aa11.02□□□□□ -0.65
VAT1-206ENST00000589709 CAVIN3Q969G5 261 aa11.02□□□□□ -0.65
VAT1-206ENST00000589709 PPCDCQ96CD2 204 aa11.02□□□□□ -0.65
VAT1-206ENST00000589709 MTERF3Q96E29 417 aa11.02□□□□□ -0.65
VAT1-206ENST00000589709 ZBED6CLQ96FA7 236 aaPredicted RBP11.02□□□□□ -0.65
VAT1-206ENST00000589709 TBL1XR1Q9BZK7 514 aa11.02□□□□□ -0.65
VAT1-206ENST00000589709 TUBB1Q9H4B7 451 aa11.02□□□□□ -0.65
VAT1-206ENST00000589709 ACSS1Q9NUB1 689 aaPredicted RBP11.02□□□□□ -0.65
VAT1-206ENST00000589709 MKS1Q9NXB0 559 aa11.02□□□□□ -0.65
VAT1-206ENST00000589709 TMED5Q9Y3A6 229 aa11.02□□□□□ -0.65
VAT1-206ENST00000589709 AP4B1Q9Y6B7 739 aa11.02□□□□□ -0.65
VAT1-206ENST00000589709 ACANP16112 2415 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 GXYLT2A0PJZ3 443 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 SMIM23A6NLE4 172 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 ALG1L2C9J202 215 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 ANGPTL1O95841 491 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 CHEK2O96017 543 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 IGKV1D-16P01601 117 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 SDC1P18827 310 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 LCN1P31025 176 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 GPC1P35052 558 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 KIR2DL2P43627 348 aaPredicted RBP11.01□□□□□ -0.65
VAT1-206ENST00000589709 ASMTP46597 345 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 MANFP55145 182 aaKnown RBP11.01□□□□□ -0.65
VAT1-206ENST00000589709 HSPB3Q12988 150 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 STX5Q13190 355 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 KEAP1Q14145 624 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 PCLAFQ15004 111 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 DEFB113Q30KQ7 82 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 KRTAP21-3Q3LHN1 58 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 RFTN2Q52LD8 501 aaPredicted RBP11.01□□□□□ -0.65
VAT1-206ENST00000589709 KANK2Q63ZY3 851 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 HDXQ7Z353 690 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 BTLAQ7Z6A9 289 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 UBQLNLQ8IYU4 475 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 C4orf33Q8N1A6 199 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 METTL25Q8N6Q8 603 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 OR6Y1Q8NGX8 325 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 OR2T11Q8NH01 316 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 FAM110BQ8TC76 370 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 GPR151Q8TDV0 419 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 EPS8L3Q8TE67 593 aaKnown RBP11.01□□□□□ -0.65
VAT1-206ENST00000589709 AENQ8WTP8 325 aaKnown RBP11.01□□□□□ -0.65
VAT1-206ENST00000589709 FIG4Q92562 907 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 GFM2Q969S9 779 aaKnown RBP11.01□□□□□ -0.65
VAT1-206ENST00000589709 CIDECQ96AQ7 238 aaPredicted RBP11.01□□□□□ -0.65
VAT1-206ENST00000589709 PGM2Q96G03 612 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 RNF122Q9H9V4 155 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 ELOVL5Q9NYP7 299 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 STOML1Q9UBI4 398 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 TESMINQ9Y4I5 508 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 DNAJC15Q9Y5T4 150 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 PTGDR2Q9Y5Y4 395 aa11.01□□□□□ -0.65
VAT1-206ENST00000589709 NIPBLQ6KC79 2804 aaeCLIP11□□□□□ -0.65
VAT1-206ENST00000589709 GIMAP1-GIMAP5A0A087WTJ2 511 aa11□□□□□ -0.65
VAT1-206ENST00000589709 A0A087WZY1 265 aa11□□□□□ -0.65
VAT1-206ENST00000589709 H0YC42 278 aa11□□□□□ -0.65
VAT1-206ENST00000589709 LSM1O15116 133 aaKnown RBP11□□□□□ -0.65
VAT1-206ENST00000589709 AKAP10O43572 662 aa11□□□□□ -0.65
VAT1-206ENST00000589709 NPHS1O60500 1241 aa11□□□□□ -0.65
VAT1-206ENST00000589709 CGAP01215 116 aa11□□□□□ -0.65
VAT1-206ENST00000589709 LINC00032P0C843 101 aa11□□□□□ -0.65
VAT1-206ENST00000589709 CD8BP10966 210 aa11□□□□□ -0.65
VAT1-206ENST00000589709 ZNF17P17021 662 aa11□□□□□ -0.65
VAT1-206ENST00000589709 DDX5P17844 614 aaKnown RBP11□□□□□ -0.65
VAT1-206ENST00000589709 TBXA2RP21731 343 aa11□□□□□ -0.65
VAT1-206ENST00000589709 CD79BP40259 229 aa11□□□□□ -0.65
VAT1-206ENST00000589709 RFX3P48380 749 aa11□□□□□ -0.65
VAT1-206ENST00000589709 TPD52P55327 224 aaPredicted RBP11□□□□□ -0.65
VAT1-206ENST00000589709 CLDN20P56880 219 aa11□□□□□ -0.65
VAT1-206ENST00000589709 RPS3AP61247 264 aaKnown RBP11□□□□□ -0.65
VAT1-206ENST00000589709 ADAM8P78325 824 aa11□□□□□ -0.65
VAT1-206ENST00000589709 FAM27E3Q08E93 113 aa11□□□□□ -0.65
VAT1-206ENST00000589709 FOXD4Q12950 439 aaPredicted RBP11□□□□□ -0.65
VAT1-206ENST00000589709 MLC1Q15049 377 aa11□□□□□ -0.65
VAT1-206ENST00000589709 GUSBP1Q15486 140 aa11□□□□□ -0.65
VAT1-206ENST00000589709 CPEB4Q17RY0 729 aaKnown RBP eCLIP11□□□□□ -0.65
VAT1-206ENST00000589709 GRAMD1BQ3KR37 738 aa11□□□□□ -0.65
VAT1-206ENST00000589709 UGT3A2Q3SY77 523 aa11□□□□□ -0.65
VAT1-206ENST00000589709 ZNF385BQ569K4 471 aa11□□□□□ -0.65
VAT1-206ENST00000589709 EXOSC6Q5RKV6 272 aaKnown RBP11□□□□□ -0.65
VAT1-206ENST00000589709 BEND6Q5SZJ8 279 aaPredicted RBP11□□□□□ -0.65
VAT1-206ENST00000589709 ANKRD26P1Q6NSI1 321 aa11□□□□□ -0.65
VAT1-206ENST00000589709 VWA1Q6PCB0 445 aa11□□□□□ -0.65
VAT1-206ENST00000589709 ZNF474Q6S9Z5 364 aaPredicted RBP11□□□□□ -0.65
VAT1-206ENST00000589709 LRIG3Q6UXM1 1119 aa11□□□□□ -0.65
VAT1-206ENST00000589709 R3HCC1LQ7Z5L2 792 aaKnown RBP11□□□□□ -0.65
VAT1-206ENST00000589709 CNEP1R1Q8N9A8 125 aa11□□□□□ -0.65
VAT1-206ENST00000589709 BANPQ8N9N5 519 aa11□□□□□ -0.65
VAT1-206ENST00000589709 NUP43Q8NFH3 380 aa11□□□□□ -0.65
VAT1-206ENST00000589709 OR5M1Q8NGP8 315 aa11□□□□□ -0.65
VAT1-206ENST00000589709 OR4C3Q8NH37 302 aa11□□□□□ -0.65
VAT1-206ENST00000589709 FNDC9Q8TBE3 224 aa11□□□□□ -0.65
VAT1-206ENST00000589709 ACTRT2Q8TDY3 377 aa11□□□□□ -0.65
VAT1-206ENST00000589709 PIK3R3Q92569 461 aa11□□□□□ -0.65
VAT1-206ENST00000589709 GIMAP5Q96F15 307 aa11□□□□□ -0.65
VAT1-206ENST00000589709 MS4A4EQ96PG1 132 aa11□□□□□ -0.65
VAT1-206ENST00000589709 TSSK3Q96PN8 268 aa11□□□□□ -0.65
VAT1-206ENST00000589709 SLC39A3Q9BRY0 314 aa11□□□□□ -0.65
VAT1-206ENST00000589709 PINK1Q9BXM7 581 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms