RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 FAM131CQ96AQ9 280 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 EFHD2Q96C19 240 aaPredicted RBP6.92□□□□□ -1.3
ZNF540-206ENST00000589117 C1GALT1C1Q96EU7 318 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 RNFT2Q96EX2 444 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 C16orf58Q96GQ5 468 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 RIPOR3Q96MK2 946 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 ZNF681Q96N22 645 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 MDFIQ99750 246 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 GABRG3Q99928 467 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 RNF167Q9H6Y7 350 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 SYNDIG1Q9H7V2 258 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 EVA1AQ9H8M9 152 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 CERS4Q9HA82 394 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 SMURF1Q9HCE7 757 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 SNTG1Q9NSN8 517 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 MAN2C1Q9NTJ4 1040 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 TBC1D29Q9UFV1 150 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 CLEC2DQ9UHP7 191 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 PLEKHM1Q9Y4G2 1056 aa6.92□□□□□ -1.3
ZNF540-206ENST00000589117 IQCMA0A1B0GVH7 501 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 CPSF4LA6NMK7 179 aaKnown RBP6.91□□□□□ -1.3
ZNF540-206ENST00000589117 WASHC1A8K0Z3 465 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 AQP9O43315 295 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 PRKRAO75569 313 aaKnown RBP6.91□□□□□ -1.3
ZNF540-206ENST00000589117 UBXN7O94888 489 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 STATHP02808 62 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 IGFBP1P08833 259 aaPredicted RBP6.91□□□□□ -1.3
ZNF540-206ENST00000589117 ALPPL2P10696 532 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 TNFSF8P32971 234 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 ACTR1BP42025 376 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 SLC9A3P48764 834 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 MAN2A2P49641 1150 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 ACTR1AP61163 376 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 YPEL5P62699 121 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 EFNB1P98172 346 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 NFATC4Q14934 902 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 ARHGAP11BQ3KRB8 267 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 SOWAHCQ53LP3 525 aaPredicted RBP6.91□□□□□ -1.3
ZNF540-206ENST00000589117 ARMC4Q5T2S8 1044 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 ACSM5Q6NUN0 579 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 ZCCHC12Q6PEW1 402 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 PARM1Q6UWI2 310 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 PRR23CQ6ZRP0 262 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 MBOAT2Q6ZWT7 520 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 RD3Q7Z3Z2 195 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 MRGPREQ86SM8 312 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 RNF113BQ8IZP6 322 aaKnown RBP6.91□□□□□ -1.3
ZNF540-206ENST00000589117 OR2T33Q8NG76 320 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 KAT2AQ92830 837 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 SLC25A46Q96AG3 418 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 TXNDC15Q96J42 360 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 NELL2Q99435 816 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 MCHR1Q99705 422 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 AICDAQ9GZX7 198 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 FGF22Q9HCT0 170 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 POLE4Q9NR33 117 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 IL20Q9NYY1 176 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 APOBEC3BQ9UH17 382 aaKnown RBP6.91□□□□□ -1.3
ZNF540-206ENST00000589117 FBXL21Q9UKT6 434 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 CMAHPQ9Y471 501 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 ENTPD2Q9Y5L3 495 aa6.91□□□□□ -1.3
ZNF540-206ENST00000589117 SPIN1Q9Y657 262 aaPredicted RBP6.91□□□□□ -1.3
ZNF540-206ENST00000589117 LRRC72A6NJI9 287 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 CTDSP2O14595 271 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 TNFSF14O43557 240 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 AKAP8O43823 692 aaKnown RBP6.9□□□□□ -1.3
ZNF540-206ENST00000589117 STX11O75558 287 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 AK1P00568 194 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 HBQ1P09105 142 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 ZNF888P0CJ79 500 aaPredicted RBP6.9□□□□□ -1.3
ZNF540-206ENST00000589117 BMP7P18075 431 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 GTF2E2P29084 291 aaKnown RBP6.9□□□□□ -1.3
ZNF540-206ENST00000589117 PEBP1P30086 187 aaKnown RBP6.9□□□□□ -1.3
ZNF540-206ENST00000589117 GABRA5P31644 462 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 MAGEA10P43363 369 aaPredicted RBP6.9□□□□□ -1.3
ZNF540-206ENST00000589117 CDH11P55287 796 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 SCN1BQ07699 218 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 FUT5Q11128 374 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 DUSP8Q13202 625 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 TPBGQ13641 420 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 ZNF750Q32MQ0 723 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 PDZK1Q5T2W1 519 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 DDI2Q5TDH0 399 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 HEPHL1Q6MZM0 1159 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 MFSD12Q6NUT3 480 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 RPL13AP3Q6NVV1 102 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 ANKRD54Q6NXT1 300 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 USP53Q70EK8 1073 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 VRK2Q86Y07 508 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 IL22RA1Q8N6P7 574 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 KCT2Q8NC54 265 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 PSD4Q8NDX1 1056 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 OR52L1Q8NGH7 329 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 DIO2Q92813 273 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 KLHDC7BQ96G42 594 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 SLC41A3Q96GZ6 507 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 WDFY2Q96P53 400 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 WFDC6Q9BQY6 131 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 MED18Q9BUE0 208 aa6.9□□□□□ -1.3
ZNF540-206ENST00000589117 TPK1Q9H3S4 243 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms