RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 ITM2AO43736 263 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 SOX30O94993 753 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 ANGPTL1O95841 491 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 IGKV1D-16P01601 117 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 LAMP1P11279 417 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 PEPDP12955 493 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 CTSSP25774 331 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 DIO3P55073 304 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 CLDN18P56856 261 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 STX5Q13190 355 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 DUSP5Q16690 384 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 GRAMD1BQ3KR37 738 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 GLYR1Q49A26 553 aaPredicted RBP13.09□□□□□ -0.31
DDX39A-208ENST00000588692 POMZP3Q6PJE2 187 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 CAMKMTQ7Z624 323 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 MARCH3Q86UD3 253 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 LRRC34Q8IZ02 419 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 COX18Q8N8Q8 333 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 OR56A1Q8NGH5 318 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 FBXO30Q8TB52 745 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 FAM110BQ8TC76 370 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 DUSP19Q8WTR2 217 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 WNT2BQ93097 391 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 MOAP1Q96BY2 351 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 STACQ99469 402 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 SH3GL2Q99962 352 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 ZNF559Q9BR84 538 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 G6PC3Q9BUM1 346 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 KCNK9Q9NPC2 374 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 MED11Q9P086 117 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 HAO1Q9UJM8 370 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 RPH3AQ9Y2J0 694 aaPredicted RBP13.09□□□□□ -0.31
DDX39A-208ENST00000588692 L3MBTL1Q9Y468 752 aa13.09□□□□□ -0.31
DDX39A-208ENST00000588692 CLCA1A8K7I4 914 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 C17orf51A8MQB3 221 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 ALG1L2C9J202 215 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 ANKRD17O75179 2603 aaKnown RBP13.08□□□□□ -0.32
DDX39A-208ENST00000588692 ERLIN1O75477 346 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 KCNK2O95069 426 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 HMGN2P05204 90 aaKnown RBP13.08□□□□□ -0.32
DDX39A-208ENST00000588692 KRT16P08779 473 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 G6PDP11413 515 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 HK1P19367 917 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 EFNA1P20827 205 aaPredicted RBP13.08□□□□□ -0.32
DDX39A-208ENST00000588692 SLC1A6P48664 564 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 STARP49675 285 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 RPL14P50914 215 aaKnown RBP13.08□□□□□ -0.32
DDX39A-208ENST00000588692 DGKQP52824 942 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 DLX5P56178 289 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 CLDN8P56748 225 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 B3GALT5-AS1P59052 145 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 SRYQ05066 204 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 MYBPHQ13203 477 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 PDCD2Q16342 344 aaPredicted RBP13.08□□□□□ -0.32
DDX39A-208ENST00000588692 RAET1LQ5VY80 246 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 ARSKQ6UWY0 536 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 OTOGQ6ZRI0 2925 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 KRTCAP2Q8N6L1 136 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 C9orf106Q8NAJ2 232 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 SFXN5Q8TD22 340 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 JADE3Q92613 823 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 RNASE6Q93091 150 aaKnown RBP13.08□□□□□ -0.32
DDX39A-208ENST00000588692 C1GALT1C1Q96EU7 318 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 SORT1Q99523 831 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 SFXN3Q9BWM7 321 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 RTN4RQ9BZR6 473 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 CLCF1Q9UBD9 225 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 SNX8Q9Y5X2 465 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 CSMD1Q96PZ7 3565 aa13.08□□□□□ -0.32
DDX39A-208ENST00000588692 HCRTR2O43614 444 aa13.07□□□□□ -0.32
DDX39A-208ENST00000588692 RCBTB2O95199 551 aa13.07□□□□□ -0.32
DDX39A-208ENST00000588692 OXSR1O95747 527 aaPredicted RBP13.07□□□□□ -0.32
DDX39A-208ENST00000588692 TMIGD3P0DMS9 266 aaPredicted RBP13.07□□□□□ -0.32
DDX39A-208ENST00000588692 POU3F2P20265 443 aaPredicted RBP13.07□□□□□ -0.32
DDX39A-208ENST00000588692 TBXA2RP21731 343 aa13.07□□□□□ -0.32
DDX39A-208ENST00000588692 BGNP21810 368 aa13.07□□□□□ -0.32
DDX39A-208ENST00000588692 UQCRC1P31930 480 aa13.07□□□□□ -0.32
DDX39A-208ENST00000588692 CCT3P49368 545 aaKnown RBP13.07□□□□□ -0.32
DDX39A-208ENST00000588692 EEFSECP57772 596 aaKnown RBP13.07□□□□□ -0.32
DDX39A-208ENST00000588692 EEF1A1P68104 462 aaKnown RBP13.07□□□□□ -0.32
DDX39A-208ENST00000588692 POU6F2P78424 691 aaPredicted RBP13.07□□□□□ -0.32
DDX39A-208ENST00000588692 MPP2Q14168 576 aa13.07□□□□□ -0.32
DDX39A-208ENST00000588692 LASP1Q14847 261 aaKnown RBP13.07□□□□□ -0.32
DDX39A-208ENST00000588692 SPDYE7PQ495Y7 208 aa13.07□□□□□ -0.32
DDX39A-208ENST00000588692 EEF1A1P5Q5VTE0 462 aa13.07□□□□□ -0.32
DDX39A-208ENST00000588692 CDC73Q6P1J9 531 aa13.07□□□□□ -0.32
DDX39A-208ENST00000588692 BHLHB9Q6PI77 547 aa13.07□□□□□ -0.32
DDX39A-208ENST00000588692 APOOLQ6UXV4 268 aa13.07□□□□□ -0.32
DDX39A-208ENST00000588692 MISPQ8IVT2 679 aa13.07□□□□□ -0.32
DDX39A-208ENST00000588692 MEIOBQ8N635 442 aa13.07□□□□□ -0.32
DDX39A-208ENST00000588692 C16orf58Q96GQ5 468 aa13.07□□□□□ -0.32
DDX39A-208ENST00000588692 PIGQQ9BRB3 760 aa13.07□□□□□ -0.32
DDX39A-208ENST00000588692 DUSP26Q9BV47 211 aa13.07□□□□□ -0.32
DDX39A-208ENST00000588692 BTBD2Q9BX70 525 aa13.07□□□□□ -0.32
DDX39A-208ENST00000588692 ACTRT3Q9BYD9 372 aa13.07□□□□□ -0.32
DDX39A-208ENST00000588692 C20orf27Q9GZN8 174 aa13.07□□□□□ -0.32
DDX39A-208ENST00000588692 PIGUQ9H490 435 aa13.07□□□□□ -0.32
DDX39A-208ENST00000588692 CXorf36Q9H7Y0 433 aa13.07□□□□□ -0.32
DDX39A-208ENST00000588692 ZNF395Q9H8N7 513 aaPredicted RBP13.07□□□□□ -0.32
DDX39A-208ENST00000588692 UBQLN4Q9NRR5 601 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms