RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 ANGPTL1O95841 491 aa17.39■□□□□ 0.37
TRAF4-216ENST00000586813 IFI6P09912 130 aa17.39■□□□□ 0.37
TRAF4-216ENST00000586813 PRR5P85299 388 aa17.39■□□□□ 0.37
TRAF4-216ENST00000586813 C17orf67Q0P5P2 114 aa17.39■□□□□ 0.37
TRAF4-216ENST00000586813 NOXRED1Q6NXP6 359 aa17.39■□□□□ 0.37
TRAF4-216ENST00000586813 PRSS57Q6UWY2 283 aa17.39■□□□□ 0.37
TRAF4-216ENST00000586813 APOOLQ6UXV4 268 aa17.39■□□□□ 0.37
TRAF4-216ENST00000586813 ZYG11AQ6WRX3 759 aa17.39■□□□□ 0.37
TRAF4-216ENST00000586813 C20orf204Q6ZNR8 217 aa17.39■□□□□ 0.37
TRAF4-216ENST00000586813 FAM214BQ7L5A3 538 aa17.39■□□□□ 0.37
TRAF4-216ENST00000586813 CIARTQ8N365 385 aaPredicted RBP17.39■□□□□ 0.37
TRAF4-216ENST00000586813 MZB1Q8WU39 189 aa17.39■□□□□ 0.37
TRAF4-216ENST00000586813 CAVIN3Q969G5 261 aa17.39■□□□□ 0.37
TRAF4-216ENST00000586813 Q96MF0 132 aa17.39■□□□□ 0.37
TRAF4-216ENST00000586813 C3orf14Q9HBI5 128 aa17.39■□□□□ 0.37
TRAF4-216ENST00000586813 EQTNQ9NQ60 294 aa17.39■□□□□ 0.37
TRAF4-216ENST00000586813 PSMC3IPQ9P2W1 217 aaPredicted RBP17.39■□□□□ 0.37
TRAF4-216ENST00000586813 GXYLT2A0PJZ3 443 aa17.38■□□□□ 0.37
TRAF4-216ENST00000586813 SHISA8B8ZZ34 492 aa17.38■□□□□ 0.37
TRAF4-216ENST00000586813 H3BQF6 201 aa17.38■□□□□ 0.37
TRAF4-216ENST00000586813 H7C1Q1 480 aa17.38■□□□□ 0.37
TRAF4-216ENST00000586813 CRCPO75575 148 aa17.38■□□□□ 0.37
TRAF4-216ENST00000586813 KCNH1O95259 989 aa17.38■□□□□ 0.37
TRAF4-216ENST00000586813 LY6G6DO95868 133 aa17.38■□□□□ 0.37
TRAF4-216ENST00000586813 IGKV1D-16P01601 117 aa17.38■□□□□ 0.37
TRAF4-216ENST00000586813 MYL2P10916 166 aa17.38■□□□□ 0.37
TRAF4-216ENST00000586813 LOXP28300 417 aaPredicted RBP17.38■□□□□ 0.37
TRAF4-216ENST00000586813 GABRA3P34903 492 aa17.38■□□□□ 0.37
TRAF4-216ENST00000586813 HSPB3Q12988 150 aa17.38■□□□□ 0.37
TRAF4-216ENST00000586813 SGCBQ16585 318 aa17.38■□□□□ 0.37
TRAF4-216ENST00000586813 GRAMD1BQ3KR37 738 aa17.38■□□□□ 0.37
TRAF4-216ENST00000586813 FRMD7Q6ZUT3 714 aa17.38■□□□□ 0.37
TRAF4-216ENST00000586813 C22orf34Q6ZV56 151 aa17.38■□□□□ 0.37
TRAF4-216ENST00000586813 YTHDF3Q7Z739 585 aaKnown RBP17.38■□□□□ 0.37
TRAF4-216ENST00000586813 PIK3R3Q92569 461 aa17.38■□□□□ 0.37
TRAF4-216ENST00000586813 PERPQ96FX8 193 aa17.38■□□□□ 0.37
TRAF4-216ENST00000586813 RRAGDQ9NQL2 400 aaPredicted RBP17.38■□□□□ 0.37
TRAF4-216ENST00000586813 DCDC2Q9UHG0 476 aa17.38■□□□□ 0.37
TRAF4-216ENST00000586813 VDAC3Q9Y277 283 aa17.38■□□□□ 0.37
TRAF4-216ENST00000586813 TTC36A6NLP5 189 aa17.37■□□□□ 0.37
TRAF4-216ENST00000586813 ZNF17P17021 662 aa17.37■□□□□ 0.37
TRAF4-216ENST00000586813 TBXA2RP21731 343 aa17.37■□□□□ 0.37
TRAF4-216ENST00000586813 SLC6A8P48029 635 aa17.37■□□□□ 0.37
TRAF4-216ENST00000586813 NAA20P61599 178 aa17.37■□□□□ 0.37
TRAF4-216ENST00000586813 EXOC3L2Q2M3D2 409 aa17.37■□□□□ 0.37
TRAF4-216ENST00000586813 ANKRD34AQ69YU3 496 aa17.37■□□□□ 0.37
TRAF4-216ENST00000586813 ZNF551Q7Z340 670 aaPredicted RBP17.37■□□□□ 0.37
TRAF4-216ENST00000586813 PPP1R14CQ8TAE6 165 aa17.37■□□□□ 0.37
TRAF4-216ENST00000586813 HOXB13Q92826 284 aaPredicted RBP17.37■□□□□ 0.37
TRAF4-216ENST00000586813 EGLN2Q96KS0 407 aa17.37■□□□□ 0.37
TRAF4-216ENST00000586813 KLHL4Q9C0H6 718 aa17.37■□□□□ 0.37
TRAF4-216ENST00000586813 TNFRSF12AQ9NP84 129 aa17.37■□□□□ 0.37
TRAF4-216ENST00000586813 TBK1Q9UHD2 729 aa17.37■□□□□ 0.37
TRAF4-216ENST00000586813 EMC9Q9Y3B6 208 aa17.37■□□□□ 0.37
TRAF4-216ENST00000586813 CCL27Q9Y4X3 112 aa17.37■□□□□ 0.37
TRAF4-216ENST00000586813 EIF1AYO14602 144 aaKnown RBP17.36■□□□□ 0.37
TRAF4-216ENST00000586813 GLRA3O75311 464 aa17.36■□□□□ 0.37
TRAF4-216ENST00000586813 MAP3K8P41279 467 aa17.36■□□□□ 0.37
TRAF4-216ENST00000586813 EIF1AXP47813 144 aaKnown RBP17.36■□□□□ 0.37
TRAF4-216ENST00000586813 SLC29A2Q14542 456 aa17.36■□□□□ 0.37
TRAF4-216ENST00000586813 PPP4R4Q6NUP7 873 aa17.36■□□□□ 0.37
TRAF4-216ENST00000586813 CNPY4Q8N129 248 aa17.36■□□□□ 0.37
TRAF4-216ENST00000586813 OR6K3Q8NGY3 331 aa17.36■□□□□ 0.37
TRAF4-216ENST00000586813 GPR151Q8TDV0 419 aa17.36■□□□□ 0.37
TRAF4-216ENST00000586813 SLC9A6Q92581 669 aa17.36■□□□□ 0.37
TRAF4-216ENST00000586813 METTL2AQ96IZ6 378 aaKnown RBP17.36■□□□□ 0.37
TRAF4-216ENST00000586813 BDH2Q9BUT1 245 aa17.36■□□□□ 0.37
TRAF4-216ENST00000586813 PRRG4Q9BZD6 226 aa17.36■□□□□ 0.37
TRAF4-216ENST00000586813 STOML1Q9UBI4 398 aa17.36■□□□□ 0.37
TRAF4-216ENST00000586813 UQCRHLA0A096LP55 91 aa17.35■□□□□ 0.37
TRAF4-216ENST00000586813 A0A1W2PPM1 405 aa17.35■□□□□ 0.37
TRAF4-216ENST00000586813 ALG1L2C9J202 215 aa17.35■□□□□ 0.37
TRAF4-216ENST00000586813 PDPK1O15530 556 aa17.35■□□□□ 0.37
TRAF4-216ENST00000586813 SS18L1O75177 396 aaPredicted RBP17.35■□□□□ 0.37
TRAF4-216ENST00000586813 NKX2-2O95096 273 aa17.35■□□□□ 0.37
TRAF4-216ENST00000586813 PLGP00747 810 aaPredicted RBP17.35■□□□□ 0.37
TRAF4-216ENST00000586813 PROCP04070 461 aa17.35■□□□□ 0.37
TRAF4-216ENST00000586813 THBDP07204 575 aa17.35■□□□□ 0.37
TRAF4-216ENST00000586813 PRPS2P11908 318 aa17.35■□□□□ 0.37
TRAF4-216ENST00000586813 GPC1P35052 558 aa17.35■□□□□ 0.37
TRAF4-216ENST00000586813 KIAA0040Q15053 153 aa17.35■□□□□ 0.37
TRAF4-216ENST00000586813 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.35■□□□□ 0.37
TRAF4-216ENST00000586813 VPS26BQ4G0F5 336 aa17.35■□□□□ 0.37
TRAF4-216ENST00000586813 CFAP157Q5JU67 520 aa17.35■□□□□ 0.37
TRAF4-216ENST00000586813 ANKRD26P1Q6NSI1 321 aa17.35■□□□□ 0.37
TRAF4-216ENST00000586813 EXOC3L1Q86VI1 746 aa17.35■□□□□ 0.37
TRAF4-216ENST00000586813 OR10D3Q8NH80 312 aa17.35■□□□□ 0.37
TRAF4-216ENST00000586813 NUDT8Q8WV74 236 aa17.35■□□□□ 0.37
TRAF4-216ENST00000586813 CIDECQ96AQ7 238 aaPredicted RBP17.35■□□□□ 0.37
TRAF4-216ENST00000586813 GMPPAQ96IJ6 420 aaPredicted RBP17.35■□□□□ 0.37
TRAF4-216ENST00000586813 ADGRG7Q96K78 797 aa17.35■□□□□ 0.37
TRAF4-216ENST00000586813 PLSCR4Q9NRQ2 329 aa17.35■□□□□ 0.37
TRAF4-216ENST00000586813 CLEC4AQ9UMR7 237 aa17.35■□□□□ 0.37
TRAF4-216ENST00000586813 PTGDR2Q9Y5Y4 395 aa17.35■□□□□ 0.37
TRAF4-216ENST00000586813 ZANQ9Y493 2812 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 A0A087WZY1 265 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.34■□□□□ 0.37
TRAF4-216ENST00000586813 TRIM64A6NGJ6 449 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 TRIM64BA6NI03 449 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 NDUFB5O43674 189 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms