RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 FMO6PO60774 539 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 UGT2B17O75795 530 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 ZIC2O95409 532 aaPredicted RBP9.64□□□□□ -0.87
LIG3-203ENST00000585370 ADAP00813 363 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 GNAO1P09471 354 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 CCNYL3P0C7X3 344 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 IL7RP16871 459 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 TNFRSF1BP20333 461 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 RPS4Y1P22090 263 aaKnown RBP9.64□□□□□ -0.87
LIG3-203ENST00000585370 LCN1P31025 176 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 RORAP35398 523 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 YAP1P46937 504 aaKnown RBP9.64□□□□□ -0.87
LIG3-203ENST00000585370 OR1D4P47884 311 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 EMDP50402 254 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 NUP107P57740 925 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 CXCR4P61073 352 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 DCAF7P61962 342 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 ESRRGP62508 458 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 COX10Q12887 443 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 ZNF155Q12901 538 aaPredicted RBP9.64□□□□□ -0.87
LIG3-203ENST00000585370 IL11RAQ14626 422 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 EXOSC7Q15024 291 aaKnown RBP9.64□□□□□ -0.87
LIG3-203ENST00000585370 ELAVL1Q15717 326 aaKnown RBP9.64□□□□□ -0.87
LIG3-203ENST00000585370 SYT16Q17RD7 645 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 ISXQ2M1V0 245 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 CYP27C1Q4G0S4 372 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 ZNF691Q5VV52 312 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 DEF8Q6ZN54 512 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 TMEM151BQ8IW70 566 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 OFCC1Q8IZS5 231 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 ZNF786Q8N393 782 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 ZNF843Q8N446 348 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 SLC5A8Q8N695 610 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 OR14A16Q8NHC5 309 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 DAZLQ92904 295 aaKnown RBP9.64□□□□□ -0.87
LIG3-203ENST00000585370 FBXL20Q96IG2 436 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 SLC46A1Q96NT5 459 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 PITX2Q99697 317 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 HOXD1Q9GZZ0 328 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 OR10A5Q9H207 317 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 POLR1BQ9H9Y6 1135 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 Q9N2J8 555 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 NECTIN3Q9NQS3 549 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 MRTO4Q9UKD2 239 aaKnown RBP9.64□□□□□ -0.87
LIG3-203ENST00000585370 ATXN7L1Q9ULK2 861 aaPredicted RBP9.64□□□□□ -0.87
LIG3-203ENST00000585370 NDRG4Q9ULP0 352 aaKnown RBP9.64□□□□□ -0.87
LIG3-203ENST00000585370 A4GNTQ9UNA3 340 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 ZNF443Q9Y2A4 671 aaPredicted RBP9.64□□□□□ -0.87
LIG3-203ENST00000585370 TMEM184BQ9Y519 407 aaPredicted RBP9.64□□□□□ -0.87
LIG3-203ENST00000585370 CLDN16Q9Y5I7 305 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 GMPPBQ9Y5P6 360 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 MAU2Q9Y6X3 613 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 COL6A6A6NMZ7 2263 aa9.64□□□□□ -0.87
LIG3-203ENST00000585370 COL27A1Q8IZC6 1860 aaPredicted RBP9.64□□□□□ -0.87
LIG3-203ENST00000585370 AHCTF1Q8WYP5 2266 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 IGLV3-12A0A075B6K2 115 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 MYOCOSA0A1B0GUC4 107 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 PMS2P1A4D2B8 440 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 DPPA5A6NC42 116 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 TRIM64CA6NLI5 447 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 E9PQ18 207 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 TGFBR3LH3BV60 316 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 J3KTA2 159 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 NTN3O00634 580 aaPredicted RBP9.63□□□□□ -0.87
LIG3-203ENST00000585370 FFAR1O14842 300 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 PCDH17O14917 1159 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 KIAA0513O60268 411 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 FCMRO60667 390 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 MRPS14O60783 128 aaKnown RBP9.63□□□□□ -0.87
LIG3-203ENST00000585370 KCNK2O95069 426 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 OR5F1O95221 314 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 NID1P14543 1247 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 GSTM3P21266 225 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 MAOAP21397 527 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 CBLP22681 906 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 CSTF2P33240 577 aaKnown RBP eCLIP9.63□□□□□ -0.87
LIG3-203ENST00000585370 ISL1P61371 349 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 IL1RL1Q01638 556 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 TEKQ02763 1124 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 OCA2Q04671 838 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 ST3GAL3Q11203 375 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 ERV3-1Q14264 604 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 TRAM2Q15035 370 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 C6orf141Q5SZD1 244 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 ARHGAP40Q5TG30 622 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 RNF220Q5VTB9 566 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 CD300LDQ6UXZ3 194 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 DGAT2L6Q6ZPD8 337 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 RANBP3LQ86VV4 465 aaPredicted RBP9.63□□□□□ -0.87
LIG3-203ENST00000585370 VRK2Q86Y07 508 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 GRAMD2AQ8IUY3 354 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 CMIPQ8IY22 773 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 DEPDC4Q8N2C3 294 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 OR6T1Q8NGN1 323 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 OR52J3Q8NH60 311 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 VANGL1Q8TAA9 524 aaPredicted RBP9.63□□□□□ -0.87
LIG3-203ENST00000585370 ADAMTS16Q8TE57 1224 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 FBLIM1Q8WUP2 373 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 SLC38A4Q969I6 547 aa9.63□□□□□ -0.87
LIG3-203ENST00000585370 OTUB1Q96FW1 271 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms