RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 SH2D4BQ5SQS7 431 aa13.5□□□□□ -0.25
VAPA-209ENST00000585042 TMEM107Q6UX40 140 aa13.5□□□□□ -0.25
VAPA-209ENST00000585042 MARCH3Q86UD3 253 aa13.5□□□□□ -0.25
VAPA-209ENST00000585042 GSPT2Q8IYD1 628 aaKnown RBP13.5□□□□□ -0.25
VAPA-209ENST00000585042 ZNF610Q8N9Z0 462 aa13.5□□□□□ -0.25
VAPA-209ENST00000585042 HOXB13Q92826 284 aaPredicted RBP13.5□□□□□ -0.25
VAPA-209ENST00000585042 PIK3IP1Q96FE7 263 aa13.5□□□□□ -0.25
VAPA-209ENST00000585042 COX4I2Q96KJ9 171 aa13.5□□□□□ -0.25
VAPA-209ENST00000585042 TBL1XR1Q9BZK7 514 aa13.5□□□□□ -0.25
VAPA-209ENST00000585042 OPN3Q9H1Y3 402 aaPredicted RBP13.5□□□□□ -0.25
VAPA-209ENST00000585042 ANKZF1Q9H8Y5 726 aa13.5□□□□□ -0.25
VAPA-209ENST00000585042 FANCFQ9NPI8 374 aa13.5□□□□□ -0.25
VAPA-209ENST00000585042 RRAGDQ9NQL2 400 aaPredicted RBP13.5□□□□□ -0.25
VAPA-209ENST00000585042 GLRX2Q9NS18 164 aa13.5□□□□□ -0.25
VAPA-209ENST00000585042 PSMC3IPQ9P2W1 217 aaPredicted RBP13.5□□□□□ -0.25
VAPA-209ENST00000585042 METRNQ9UJH8 293 aa13.5□□□□□ -0.25
VAPA-209ENST00000585042 PROCRQ9UNN8 238 aa13.5□□□□□ -0.25
VAPA-209ENST00000585042 ARID1AO14497 2285 aa13.5□□□□□ -0.25
VAPA-209ENST00000585042 A0A087WZY1 265 aa13.49□□□□□ -0.25
VAPA-209ENST00000585042 NPIPB8E9PQR5 432 aa13.49□□□□□ -0.25
VAPA-209ENST00000585042 UBFD1O14562 309 aaKnown RBP13.49□□□□□ -0.25
VAPA-209ENST00000585042 UTS2O95399 124 aa13.49□□□□□ -0.25
VAPA-209ENST00000585042 NGFRP08138 427 aa13.49□□□□□ -0.25
VAPA-209ENST00000585042 ZNF17P17021 662 aa13.49□□□□□ -0.25
VAPA-209ENST00000585042 TCEA1P23193 301 aaKnown RBP13.49□□□□□ -0.25
VAPA-209ENST00000585042 LCN1P31025 176 aa13.49□□□□□ -0.25
VAPA-209ENST00000585042 MAP3K8P41279 467 aa13.49□□□□□ -0.25
VAPA-209ENST00000585042 CLDN20P56880 219 aa13.49□□□□□ -0.25
VAPA-209ENST00000585042 SGCBQ16585 318 aa13.49□□□□□ -0.25
VAPA-209ENST00000585042 PRSS53Q2L4Q9 553 aa13.49□□□□□ -0.25
VAPA-209ENST00000585042 VPS26BQ4G0F5 336 aa13.49□□□□□ -0.25
VAPA-209ENST00000585042 FAM219BQ5XKK7 198 aa13.49□□□□□ -0.25
VAPA-209ENST00000585042 NOXRED1Q6NXP6 359 aa13.49□□□□□ -0.25
VAPA-209ENST00000585042 CEP70Q8NHQ1 597 aa13.49□□□□□ -0.25
VAPA-209ENST00000585042 FNDC9Q8TBE3 224 aa13.49□□□□□ -0.25
VAPA-209ENST00000585042 GMPPAQ96IJ6 420 aaPredicted RBP13.49□□□□□ -0.25
VAPA-209ENST00000585042 KCNA7Q96RP8 456 aa13.49□□□□□ -0.25
VAPA-209ENST00000585042 CCL19Q99731 98 aa13.49□□□□□ -0.25
VAPA-209ENST00000585042 RTN4RQ9BZR6 473 aa13.49□□□□□ -0.25
VAPA-209ENST00000585042 OR10A4Q9H209 315 aa13.49□□□□□ -0.25
VAPA-209ENST00000585042 NTMQ9P121 344 aa13.49□□□□□ -0.25
VAPA-209ENST00000585042 EMC9Q9Y3B6 208 aa13.49□□□□□ -0.25
VAPA-209ENST00000585042 PCNX3Q9H6A9 2034 aa13.49□□□□□ -0.25
VAPA-209ENST00000585042 C7orf72A4D263 438 aa13.48□□□□□ -0.25
VAPA-209ENST00000585042 C17orf51A8MQB3 221 aa13.48□□□□□ -0.25
VAPA-209ENST00000585042 ALG1L2C9J202 215 aa13.48□□□□□ -0.25
VAPA-209ENST00000585042 H0YC42 278 aa13.48□□□□□ -0.25
VAPA-209ENST00000585042 H3BML4 177 aa13.48□□□□□ -0.25
VAPA-209ENST00000585042 SEC14L5O43304 696 aa13.48□□□□□ -0.25
VAPA-209ENST00000585042 TBX19O60806 448 aa13.48□□□□□ -0.25
VAPA-209ENST00000585042 ANGPTL1O95841 491 aa13.48□□□□□ -0.25
VAPA-209ENST00000585042 TUBBP07437 444 aa13.48□□□□□ -0.25
VAPA-209ENST00000585042 PRPS2P11908 318 aa13.48□□□□□ -0.25
VAPA-209ENST00000585042 PAX1P15863 534 aa13.48□□□□□ -0.25
VAPA-209ENST00000585042 PRPH2P23942 346 aa13.48□□□□□ -0.25
VAPA-209ENST00000585042 GABRA3P34903 492 aa13.48□□□□□ -0.25
VAPA-209ENST00000585042 FOXA1P55317 472 aa13.48□□□□□ -0.25
VAPA-209ENST00000585042 TPD52P55327 224 aaPredicted RBP13.48□□□□□ -0.25
VAPA-209ENST00000585042 DNAJB13P59910 316 aa13.48□□□□□ -0.25
VAPA-209ENST00000585042 SIRPAP78324 504 aa13.48□□□□□ -0.25
VAPA-209ENST00000585042 ZYG11AQ6WRX3 759 aa13.48□□□□□ -0.25
VAPA-209ENST00000585042 WDR75Q8IWA0 830 aaKnown RBP13.48□□□□□ -0.25
VAPA-209ENST00000585042 CCNYL1Q8N7R7 359 aa13.48□□□□□ -0.25
VAPA-209ENST00000585042 OR6K3Q8NGY3 331 aa13.48□□□□□ -0.25
VAPA-209ENST00000585042 ACTRT2Q8TDY3 377 aa13.48□□□□□ -0.25
VAPA-209ENST00000585042 GSX2Q9BZM3 304 aa13.48□□□□□ -0.25
VAPA-209ENST00000585042 FLRT3Q9NZU0 649 aa13.48□□□□□ -0.25
VAPA-209ENST00000585042 G3V2L1 256 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 NKX2-2O95096 273 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 LY6G6DO95868 133 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 UROSP10746 265 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 MYL2P10916 166 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 LOXP28300 417 aaPredicted RBP13.47□□□□□ -0.25
VAPA-209ENST00000585042 CCKARP32238 428 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 NR1H2P55055 460 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 STX5Q13190 355 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 KIAA0040Q15053 153 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.47□□□□□ -0.252e-8■■■■■ 27
VAPA-209ENST00000585042 CCDC153Q494R4 210 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 BEX5Q5H9J7 111 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 GTF2IRD2BQ6EKJ0 949 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 WDR93Q6P2C0 686 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 EMBQ6PCB8 327 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 ZCCHC12Q6PEW1 402 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 FRMD7Q6ZUT3 714 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 SH2D5Q6ZV89 423 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 PLEKHM3Q6ZWE6 761 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 Q71RC1 249 aaPredicted RBP13.47□□□□□ -0.25
VAPA-209ENST00000585042 YTHDF3Q7Z739 585 aaKnown RBP13.47□□□□□ -0.25
VAPA-209ENST00000585042 GTF2IRD2Q86UP8 949 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 GGNQ86UU5 652 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 EXOC3L1Q86VI1 746 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 GTPBP8Q8N3Z3 284 aaPredicted RBP13.47□□□□□ -0.25
VAPA-209ENST00000585042 CDRT4Q8N9R6 151 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 CDC26Q8NHZ8 85 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 FAM110BQ8TC76 370 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 ZBTB8AQ96BR9 441 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 PRRG4Q9BZD6 226 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 UBTD1Q9HAC8 227 aa13.47□□□□□ -0.25
VAPA-209ENST00000585042 MCTS1Q9ULC4 181 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms