RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 HMGN4O00479 90 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 NDUFB5O43674 189 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 TRAPPC6AO75865 159 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 SORBS2O94875 1100 aaKnown RBP12.7□□□□□ -0.38
TRAF4-215ENST00000584944 BCHEP06276 602 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 ENDOUP21128 410 aaKnown RBP12.7□□□□□ -0.38
TRAF4-215ENST00000584944 PRDX6P30041 224 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 MAN2A2P49641 1150 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 PPIAP62937 165 aaKnown RBP12.7□□□□□ -0.38
TRAF4-215ENST00000584944 PMP22Q01453 160 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 GRAMD1BQ3KR37 738 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 COX20Q5RI15 118 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 BICRALQ6AI39 1079 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 ARPINQ7Z6K5 226 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 ZNF227Q86WZ6 799 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 KRT73Q86Y46 540 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 OR4K17Q8NGC6 315 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 GRHL3Q8TE85 626 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 HOXB13Q92826 284 aaPredicted RBP12.7□□□□□ -0.38
TRAF4-215ENST00000584944 HGDQ93099 445 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 LRRC58Q96CX6 371 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 ANKRD27Q96NW4 1050 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 NODALQ96S42 347 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 ANGPTL4Q9BY76 406 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 MYLK2Q9H1R3 596 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 ARMC7Q9H6L4 198 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 LDAHQ9H6V9 325 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 PTGES2Q9H7Z7 377 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 ZFP64Q9NPA5 681 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 SLC52A3Q9NQ40 469 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 SLAMF8Q9P0V8 285 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 CNOT11Q9UKZ1 510 aaKnown RBP12.7□□□□□ -0.38
TRAF4-215ENST00000584944 KCNE3Q9Y6H6 103 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 PRRC2CQ9Y520 2896 aaKnown RBP12.7□□□□□ -0.38
TRAF4-215ENST00000584944 TEX15Q9BXT5 2789 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 FBP2O00757 339 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 GNB5O14775 395 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 CDC40O60508 579 aaKnown RBP eCLIP12.69□□□□□ -0.389e-6■■■□□ 15.9
TRAF4-215ENST00000584944 UNC5CO95185 931 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 H6PDO95479 791 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 ESRRAP11474 423 aaPredicted RBP12.69□□□□□ -0.38
TRAF4-215ENST00000584944 TBXA2RP21731 343 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 SLC6A2P23975 617 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 GDF1P27539 372 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 DCTP40126 519 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 MAP3K8P41279 467 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 MTPNP58546 118 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 C17orf67Q0P5P2 114 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 DLEU7Q6UYE1 221 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 MARCH3Q86UD3 253 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 RETREG3Q86VR2 466 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 PEX5LQ8IYB4 626 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 TMCO5AQ8N6Q1 288 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 GALNT11Q8NCW6 608 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 CHDHQ8NE62 594 aaPredicted RBP12.69□□□□□ -0.38
TRAF4-215ENST00000584944 SNRNP40Q96DI7 357 aaKnown RBP12.69□□□□□ -0.38
TRAF4-215ENST00000584944 SDF2Q99470 211 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 TTTY12Q9BZ98 90 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 SERHL2Q9H4I8 314 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 GALNT9Q9HCQ5 603 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 DEPPQ9NTK1 212 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 NDE1Q9NXR1 346 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 TUBA8Q9NY65 449 aaPredicted RBP12.69□□□□□ -0.38
TRAF4-215ENST00000584944 SLC25A37Q9NYZ2 338 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 TAGLN3Q9UI15 199 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 DKKL1Q9UK85 242 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 MKLN1Q9UL63 735 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 ZNF232Q9UNY5 417 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 ANGPT4Q9Y264 503 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 AP3M1Q9Y2T2 418 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 WIF1Q9Y5W5 379 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 NOTCH2Q04721 2471 aa12.69□□□□□ -0.38
TRAF4-215ENST00000584944 A0A0G2JMM0 328 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 A0A1W2PPB8 328 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 A0A1W2PRS3 328 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 C2orf72A6NCS6 295 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 KIR3DP1A8MWS1 328 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 NPIPA5E9PKD4 350 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 ANGPTL1O95841 491 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 NUDT14O95848 222 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 IGKV1D-16P01601 117 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 NGFRP08138 427 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 PTPN6P29350 595 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 UQCRFS1P47985 274 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 ATP12AP54707 1039 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 RBPJQ06330 500 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 RUNDC3AQ59EK9 446 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 DESI1Q6ICB0 168 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 MISPQ8IVT2 679 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 ZNF619Q8N2I2 560 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 Q8NA96 180 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 GATSQ8NAP1 163 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 ZFP62Q8NB50 900 aaPredicted RBP12.68□□□□□ -0.38
TRAF4-215ENST00000584944 C11orf65Q8NCR3 313 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 OR8J3Q8NGG0 315 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 OR4C3Q8NH37 302 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 FAM110BQ8TC76 370 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 PHOSPHO1Q8TCT1 267 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 FAR1Q8WVX9 515 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 PMM1Q92871 262 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms