RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 CORO6Q6QEF8 472 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF704Q6ZNC4 412 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 P4HA3Q7Z4N8 544 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 PRSS42Q7Z5A4 293 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TMPRSS12Q86WS5 348 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 CLIP4Q8N3C7 705 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 SFRP1Q8N474 314 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TCEANCQ8N8B7 351 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 OR10T2Q8NGX3 314 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 LILRB1Q8NHL6 650 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 PNPT1Q8TCS8 783 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 DQX1Q8TE96 717 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 GGHQ92820 318 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 REPS1Q96D71 796 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 MED8Q96G25 268 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 GRAMD2BQ96HH9 432 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 PIWIL1Q96J94 861 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TSNARE1Q96NA8 513 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 CATSPER2Q96P56 530 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 PSKH2Q96QS6 385 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 PANX3Q96QZ0 392 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 SPAG8Q99932 426 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TIMM29Q9BSF4 260 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ZSCAN5AQ9BUG6 496 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ABHD6Q9BV23 337 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ROGDIQ9GZN7 287 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 POMKQ9H5K3 350 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 COQ10BQ9H8M1 238 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 FKRPQ9H9S5 495 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 FANCFQ9NPI8 374 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 DNAJC11Q9NVH1 559 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 DCAF16Q9NXF7 216 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 SPATA7Q9P0W8 599 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 B3GAT1Q9P2W7 334 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 NOCTQ9UK39 431 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ACSL5Q9ULC5 683 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 FAF1Q9UNN5 650 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 GVINP1Q7Z2Y8 2422 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 A0A0B4J203 849 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 GOLGA8QA0A0J9YX86 632 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TCRBV5S1A1TA0A578 114 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 GOLGA8OA6NCC3 632 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 C10orf142B7Z368 130 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 GOLGA8NF8WBI6 632 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 APOC4-APOC2K7ER74 178 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ADAM10O14672 748 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 APOC2P02655 101 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 RPA2P15927 270 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 EPCAMP16422 314 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 CEBPBP17676 345 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TPSB2P20231 275 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 OGNP20774 298 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 FCARP24071 287 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 PSMA2P25787 234 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TNFRSF8P28908 595 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 P2RY2P41231 377 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 MAGEA1P43355 309 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 MAGEA6P43360 314 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 BRCC3P46736 316 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ADARP55265 1226 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 PROK1P58294 105 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ISL1P61371 349 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 GNA12Q03113 381 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 KEAP1Q14145 624 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TEAD2Q15562 447 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TPSAB1Q15661 275 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 RIPPLY2Q5TAB7 128 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TMEM71Q6P5X7 295 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 PODNL1Q6PEZ8 512 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 C19orf48Q6RUI8 117 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 VITQ6UXI7 678 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TAS2R42Q7RTR8 314 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 EFL1Q7Z2Z2 1120 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 KIAA1328Q86T90 577 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 CUZD1Q86UP6 607 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 KLHDC8AQ8IYD2 350 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 RIBC1Q8N443 379 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ATPAF2Q8N5M1 289 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 CEP112Q8N8E3 955 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 OR13C5Q8NGS8 318 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 NTN5Q8WTR8 489 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TSSK2Q96PF2 358 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 CSF3RQ99062 836 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ATG101Q9BSB4 218 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 BBS2Q9BXC9 721 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ULBP1Q9BZM6 244 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC25A51Q9H1U9 297 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 CDC42EP4Q9H3Q1 356 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 FAM96AQ9H5X1 160 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 KCNK13Q9HB14 408 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 GDF3Q9NR23 364 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 FAM114A2Q9NRY5 505 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 TMEM184CQ9NVA4 438 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 ATAD3AQ9NVI7 634 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 OSER1Q9NX31 292 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 SOHLH2Q9NX45 425 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 SPHK1Q9NYA1 384 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 RDH8Q9NYR8 311 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 SERGEFQ9UGK8 458 aa1.76□□□□□ -2.13
SMCHD1-211ENST00000584897 MRTO4Q9UKD2 239 aaKnown RBP1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms