RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 RPH3AQ9Y2J0 694 aaPredicted RBP9.57□□□□□ -0.88
RFFL-212ENST00000584655 TPRKBQ9Y3C4 175 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 LTBP2Q14767 1821 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 ITGA2P17301 1181 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 GADD45AP24522 165 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 CD1CP29017 333 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 EMDP50402 254 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 CBX3Q13185 183 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 NR1D2Q14995 579 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 LARS2Q15031 903 aaKnown RBP9.57□□□□□ -0.88
RFFL-212ENST00000584655 TIGD6Q17RP2 521 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 ZNF425Q6IV72 752 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 BHLHB9Q6PI77 547 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 OR52E4Q8NGH9 312 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 GUCD1Q96NT3 240 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 TM9SF2Q99805 663 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 SLC38A1Q9H2H9 487 aa9.57□□□□□ -0.88
RFFL-212ENST00000584655 H3BML4 177 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 PRKYO43930 277 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 RPP14O95059 124 aaKnown RBP9.56□□□□□ -0.88
RFFL-212ENST00000584655 GPR75O95800 540 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 HLA-DQA2P01906 255 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 RPLP0P05388 317 aaKnown RBP9.56□□□□□ -0.88
RFFL-212ENST00000584655 CD79BP40259 229 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 AFF3P51826 1226 aaKnown RBP9.56□□□□□ -0.88
RFFL-212ENST00000584655 ITGA1P56199 1179 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 ABATP80404 500 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 FADDQ13158 208 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 ENPP2Q13822 863 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 MAD2L1BPQ15013 274 aaPredicted RBP9.56□□□□□ -0.88
RFFL-212ENST00000584655 TAB1Q15750 504 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 ARMCX4Q5H9R4 360 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 DCST2Q5T1A1 773 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 LYSMD4Q5XG99 296 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 MFSD12Q6NUT3 480 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 CBLN3Q6UW01 205 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 SYT9Q86SS6 491 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 FAM98AQ8NCA5 519 aaKnown RBP9.56□□□□□ -0.88
RFFL-212ENST00000584655 TEX47Q8TBZ9 253 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 NECTIN3Q9NQS3 549 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 TNFRSF10DQ9UBN6 386 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 DAPK2Q9UIK4 370 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 ADAM18Q9Y3Q7 739 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 PLXNB3Q9ULL4 1909 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 MPDZO75970 2070 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 OR2A25A4D2G3 310 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 TGFBR3LH3BV60 316 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 SNX4O95219 450 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 TIAF1O95411 115 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 ELAVL4P26378 380 aaKnown RBP9.56□□□□□ -0.88
RFFL-212ENST00000584655 RACK1P63244 317 aaKnown RBP9.56□□□□□ -0.88
RFFL-212ENST00000584655 DNASE1L3Q13609 305 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 INPP5JQ15735 1006 aaPredicted RBP9.56□□□□□ -0.88
RFFL-212ENST00000584655 ALKBH2Q6NS38 261 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 OR8K3Q8NH51 312 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 GPR119Q8TDV5 335 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 ZHX1-C8orf76Q96EF9 292 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 CNDP2Q96KP4 475 aaKnown RBP9.56□□□□□ -0.88
RFFL-212ENST00000584655 HDHD5Q9BXW7 423 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 MUC13Q9H3R2 512 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 ZNF696Q9H7X3 374 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 RMI1Q9H9A7 625 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 MRPS7Q9Y2R9 242 aaKnown RBP9.56□□□□□ -0.88
RFFL-212ENST00000584655 SOBPA7XYQ1 873 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 TMEM229AB2RXF0 380 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 CNOT3O75175 753 aaKnown RBP9.56□□□□□ -0.88
RFFL-212ENST00000584655 ZNF217O75362 1048 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 GPANK1O95872 356 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 CSTAP01040 98 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 RFC3P40938 356 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 MAGEB1P43366 347 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 GCGRP47871 477 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 CRISP1P54107 249 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 PCBP4P57723 403 aaKnown RBP9.56□□□□□ -0.88
RFFL-212ENST00000584655 LAIR2Q6ISS4 152 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 ABI3BPQ7Z7G0 1075 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 MFSD2AQ8NA29 543 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 SENP5Q96HI0 755 aaPredicted RBP9.56□□□□□ -0.88
RFFL-212ENST00000584655 ACTRT3Q9BYD9 372 aa9.56□□□□□ -0.88
RFFL-212ENST00000584655 SPIN1Q9Y657 262 aaPredicted RBP9.56□□□□□ -0.88
RFFL-212ENST00000584655 NPIPB8E9PQR5 432 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 SOCS6O14544 535 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 SIGLEC6O43699 453 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 CAPNS1P04632 268 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 LIPAP38571 399 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 EIF1AXP47813 144 aaKnown RBP9.55□□□□□ -0.88
RFFL-212ENST00000584655 KIAA1024LP59773 190 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 VEZF1Q14119 521 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 TMEM35AQ53FP2 167 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 CMPK2Q5EBM0 449 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 SAXO2Q658L1 398 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 SETD9Q8NE22 299 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 POLR2J2Q9GZM3 115 aaKnown RBP9.55□□□□□ -0.88
RFFL-212ENST00000584655 SRA1Q9HD15 236 aaKnown RBP9.55□□□□□ -0.88
RFFL-212ENST00000584655 CLN6Q9NWW5 311 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 C2orf92A0A1B0GVN3 265 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 PMS2P1A4D2B8 440 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 HRO43593 1189 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 GALR3O60755 368 aaPredicted RBP9.55□□□□□ -0.88
RFFL-212ENST00000584655 UGT2B11O75310 529 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms