RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 SSX8Q7RTT4 187 aa11.93□□□□□ -0.5
COPS3-218ENST00000584216 REXO5Q96IC2 774 aaKnown RBP11.93□□□□□ -0.5
COPS3-218ENST00000584216 GPR78Q96P69 363 aa11.93□□□□□ -0.5
COPS3-218ENST00000584216 BBS4Q96RK4 519 aa11.93□□□□□ -0.5
COPS3-218ENST00000584216 DPH5Q9H2P9 285 aa11.93□□□□□ -0.5
COPS3-218ENST00000584216 C3orf14Q9HBI5 128 aa11.93□□□□□ -0.5
COPS3-218ENST00000584216 SLC35C2Q9NQQ7 365 aa11.93□□□□□ -0.5
COPS3-218ENST00000584216 FARSBQ9NSD9 589 aaKnown RBP11.93□□□□□ -0.5
COPS3-218ENST00000584216 XPR1Q9UBH6 696 aa11.93□□□□□ -0.5
COPS3-218ENST00000584216 RNF14Q9UBS8 474 aa11.93□□□□□ -0.5
COPS3-218ENST00000584216 SAR1BQ9Y6B6 198 aa11.93□□□□□ -0.5
COPS3-218ENST00000584216 A0A087WV62 115 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 PCDH7O60245 1069 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 IL33O95760 270 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 KRT6AP02538 564 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 KRT6BP04259 564 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 THBS1P07996 1170 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 IL3P08700 152 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 ADH6P28332 368 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 AGTR1P30556 359 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 KRT6CP48668 564 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 CSTF3Q12996 717 aaKnown RBP11.92□□□□□ -0.5
COPS3-218ENST00000584216 SPIN4Q56A73 249 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 TMEM201Q5SNT2 666 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 FIGNL1Q6PIW4 674 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 CLEC2AQ6UVW9 174 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 MARCH3Q86UD3 253 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 CCDC25Q86WR0 208 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 OR7G2Q8NG99 324 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 OR2V1Q8NHB1 315 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 LILRB1Q8NHL6 650 aaPredicted RBP11.92□□□□□ -0.5
COPS3-218ENST00000584216 ZBTB8AQ96BR9 441 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 ADAD1Q96M93 576 aaKnown RBP11.92□□□□□ -0.5
COPS3-218ENST00000584216 NSUN5Q96P11 429 aaKnown RBP11.92□□□□□ -0.5
COPS3-218ENST00000584216 KCNK17Q96T54 332 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 POTEKPQ9BYX7 375 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 VPS11Q9H270 941 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 C12orf49Q9H741 205 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 TIGARQ9NQ88 270 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 VDAC3Q9Y277 283 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 USF3Q68DE3 2245 aa11.92□□□□□ -0.5
COPS3-218ENST00000584216 CUBNO60494 3623 aa11.91□□□□□ -0.5
COPS3-218ENST00000584216 TTC36A6NLP5 189 aa11.91□□□□□ -0.5
COPS3-218ENST00000584216 ADAMDEC1O15204 470 aa11.91□□□□□ -0.5
COPS3-218ENST00000584216 CXCL13O43927 109 aa11.91□□□□□ -0.5
COPS3-218ENST00000584216 NME6O75414 186 aaPredicted RBP11.91□□□□□ -0.5
COPS3-218ENST00000584216 KCNH1O95259 989 aa11.91□□□□□ -0.5
COPS3-218ENST00000584216 ANGPTL1O95841 491 aa11.91□□□□□ -0.5
COPS3-218ENST00000584216 MAGEA4P43358 317 aa11.91□□□□□ -0.5
COPS3-218ENST00000584216 ZNF41P51814 821 aaPredicted RBP11.91□□□□□ -0.5
COPS3-218ENST00000584216 NUDT6P53370 316 aa11.91□□□□□ -0.5
COPS3-218ENST00000584216 RAC1P63000 192 aa11.91□□□□□ -0.5
COPS3-218ENST00000584216 PRR5P85299 388 aa11.91□□□□□ -0.5
COPS3-218ENST00000584216 P2RY6Q15077 328 aa11.91□□□□□ -0.5
COPS3-218ENST00000584216 RNPS1Q15287 305 aaKnown RBP11.91□□□□□ -0.5
COPS3-218ENST00000584216 TSNAXIP1Q2TAA8 658 aa11.91□□□□□ -0.5
COPS3-218ENST00000584216 SFRP5Q5T4F7 317 aa11.91□□□□□ -0.5
COPS3-218ENST00000584216 HBMQ6B0K9 141 aa11.91□□□□□ -0.5
COPS3-218ENST00000584216 LETMD1Q6P1Q0 360 aa11.91□□□□□ -0.5
COPS3-218ENST00000584216 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.91□□□□□ -0.5
COPS3-218ENST00000584216 GALNT10Q86SR1 603 aa11.91□□□□□ -0.5
COPS3-218ENST00000584216 GTPBP8Q8N3Z3 284 aaPredicted RBP11.91□□□□□ -0.5
COPS3-218ENST00000584216 ROBO4Q8WZ75 1007 aa11.91□□□□□ -0.5
COPS3-218ENST00000584216 KISS1RQ969F8 398 aaPredicted RBP11.91□□□□□ -0.5
COPS3-218ENST00000584216 ADGRG7Q96K78 797 aa11.91□□□□□ -0.5
COPS3-218ENST00000584216 TRAF4Q9BUZ4 470 aaPredicted RBP11.91□□□□□ -0.5
COPS3-218ENST00000584216 DDX18Q9NVP1 670 aaKnown RBP11.91□□□□□ -0.5
COPS3-218ENST00000584216 NBEAL1Q6ZS30 2694 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 C7orf72A4D263 438 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 TNFSF11O14788 317 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 SSX4O60224 188 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 UTS2O95399 124 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 RPS17P08708 135 aaKnown RBP11.9□□□□□ -0.5
COPS3-218ENST00000584216 RFX3P48380 749 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 CASP9P55211 416 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 VLDLRP98155 873 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 BSPH1Q075Z2 132 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 ACSM2AQ08AH3 577 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 TAB1Q15750 504 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 UAP1Q16222 522 aaPredicted RBP11.9□□□□□ -0.5
COPS3-218ENST00000584216 TMEM249Q2WGJ8 235 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 PGGHGQ32M88 737 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 TCHHL1Q5QJ38 904 aaPredicted RBP11.9□□□□□ -0.5
COPS3-218ENST00000584216 AGAP6Q5VW22 663 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 ACSM2BQ68CK6 577 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 DTX2Q86UW9 622 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 GABRG1Q8N1C3 465 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 PIWIL2Q8TC59 973 aaKnown RBP11.9□□□□□ -0.5
COPS3-218ENST00000584216 TNFRSF13CQ96RJ3 184 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 RTN4RQ9BZR6 473 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 TRIM2Q9C040 744 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 SHARPINQ9H0F6 387 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 L2HGDHQ9H9P8 463 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 GP6Q9HCN6 339 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 FBXO34Q9NWN3 711 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 CISD1Q9NZ45 108 aaKnown RBP11.9□□□□□ -0.5
COPS3-218ENST00000584216 FLRT3Q9NZU0 649 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 GRID1Q9ULK0 1009 aa11.9□□□□□ -0.5
COPS3-218ENST00000584216 C19orf53Q9UNZ5 99 aaPredicted RBP11.9□□□□□ -0.5
COPS3-218ENST00000584216 UTP11Q9Y3A2 253 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms