RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 CLEC6AQ6EIG7 209 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 POMZP3Q6PJE2 187 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 C10orf107Q8IVU9 208 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 OR2L13Q8N349 312 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 OR4K17Q8NGC6 315 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 ZFP28Q8NHY6 868 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 FAM222BQ8WU58 562 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 ELP4Q96EB1 424 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 APOPT1Q96IL0 206 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 SFXN2Q96NB2 322 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 AMDHD1Q96NU7 426 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 UCN2Q96RP3 112 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 CCT7Q99832 543 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 TUBA1CQ9BQE3 449 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 TNFRSF12AQ9NP84 129 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 PPP4R1LQ9P1A2 415 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 FBXL2Q9UKC9 423 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 TMED5Q9Y3A6 229 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 CCL27Q9Y4X3 112 aa10.07□□□□□ -0.8
CCDC47-206ENST00000584112 EPPK1P58107 5090 aaKnown RBP10.07□□□□□ -0.8
CCDC47-206ENST00000584112 TLDC2A0PJX2 215 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 EEF1E1-BLOC1S5C9J1V9 151 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 UPK1AO00322 258 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 EEF1E1O43324 174 aaKnown RBP10.06□□□□□ -0.8
CCDC47-206ENST00000584112 SCO2O43819 266 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 TBX19O60806 448 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 GPC1P35052 558 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 GAS1P54826 345 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 NR1H2P55055 460 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 DSCR4P56555 118 aaPredicted RBP10.06□□□□□ -0.8
CCDC47-206ENST00000584112 EEF1A1P68104 462 aaKnown RBP10.06□□□□□ -0.8
CCDC47-206ENST00000584112 SORDQ00796 357 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 SRYQ05066 204 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 GAB1Q13480 694 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 KIAA0040Q15053 153 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 BCL2A1Q16548 175 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 PRSS53Q2L4Q9 553 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 VPS26BQ4G0F5 336 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 EEF1A1P5Q5VTE0 462 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 KANK2Q63ZY3 851 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 OR5M10Q6IEU7 315 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 ADGRE4PQ86SQ3 457 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 C9orf106Q8NAJ2 232 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 OR4N2Q8NGD1 307 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 CEP70Q8NHQ1 597 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 WNT2BQ93097 391 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 FCRL1Q96LA6 429 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 LMF2Q9BU23 707 aaKnown RBP10.06□□□□□ -0.8
CCDC47-206ENST00000584112 SFXN3Q9BWM7 321 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 GATA5Q9BWX5 397 aaPredicted RBP10.06□□□□□ -0.8
CCDC47-206ENST00000584112 C12orf65Q9H3J6 166 aaKnown RBP10.06□□□□□ -0.8
CCDC47-206ENST00000584112 REEP4Q9H6H4 257 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 PTGES2Q9H7Z7 377 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 EML4Q9HC35 981 aaKnown RBP10.06□□□□□ -0.8
CCDC47-206ENST00000584112 HHATLQ9HCP6 504 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 FAM120CQ9NX05 1096 aaKnown RBP10.06□□□□□ -0.8
CCDC47-206ENST00000584112 FIS1Q9Y3D6 152 aa10.06□□□□□ -0.8
CCDC47-206ENST00000584112 TUBAL3A6NHL2 446 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 CLCA1A8K7I4 914 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 LINC01387J3KSC0 135 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 FADS1O60427 444 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 NPHS1O60500 1241 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 ALX3O95076 343 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 RCBTB2O95199 551 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 KCNH1O95259 989 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 IL33O95760 270 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 NUDT17P0C025 328 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 PRPS2P11908 318 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 PEPDP12955 493 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 ZNF708P17019 499 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 SDC1P18827 310 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 TACR1P25103 407 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 ASMTP46597 345 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 LHX2P50458 406 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 CLDN18P56856 261 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 EEFSECP57772 596 aaKnown RBP10.05□□□□□ -0.8
CCDC47-206ENST00000584112 RPL38P63173 70 aaKnown RBP10.05□□□□□ -0.8
CCDC47-206ENST00000584112 IFFO1Q0D2I5 559 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 HSPB3Q12988 150 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 DAZAP2Q15038 168 aaPredicted RBP10.05□□□□□ -0.8
CCDC47-206ENST00000584112 FAM174BQ3ZCQ3 159 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 MIDNQ504T8 468 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 C12orf54Q6X4T0 127 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 CHMP1BQ7LBR1 199 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 TRABD2AQ86V40 505 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 GRAMD2AQ8IUY3 354 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 MEIOBQ8N635 442 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 FADS6Q8N9I5 356 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 BANPQ8N9N5 519 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 GFM2Q969S9 779 aaKnown RBP10.05□□□□□ -0.8
CCDC47-206ENST00000584112 PPCDCQ96CD2 204 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 MTERF3Q96E29 417 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 ZBED6CLQ96FA7 236 aaPredicted RBP10.05□□□□□ -0.8
CCDC47-206ENST00000584112 EGLN2Q96KS0 407 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 DSN1Q9H410 356 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 ANKZF1Q9H8Y5 726 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 JKAMPQ9P055 326 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 ARMCX1Q9P291 453 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 CLCF1Q9UBD9 225 aa10.05□□□□□ -0.8
CCDC47-206ENST00000584112 PTGDR2Q9Y5Y4 395 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms