RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 GPC6Q9Y625 555 aaPredicted RBP8.76□□□□□ -1.01
RFFL-210ENST00000582308 USP24Q9UPU5 2620 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 AGAP5A6NIR3 686 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 TMEM229AB2RXF0 380 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 ADAM10O14672 748 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 ARPC2O15144 300 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 HS6ST1O60243 411 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 FADS1O60427 444 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 UGT2B17O75795 530 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 MFN2O95140 757 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 OXSR1O95747 527 aaPredicted RBP8.75□□□□□ -1.01
RFFL-210ENST00000582308 F10P00742 488 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 NQO1P15559 274 aaKnown RBP8.75□□□□□ -1.01
RFFL-210ENST00000582308 TBXA2RP21731 343 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 LCN1P31025 176 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 DCTP40126 519 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 CYB561P49447 251 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 TMED10P49755 219 aaKnown RBP8.75□□□□□ -1.01
RFFL-210ENST00000582308 ATP12AP54707 1039 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 PSMD4P55036 377 aaKnown RBP8.75□□□□□ -1.01
RFFL-210ENST00000582308 DMTNQ08495 405 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 TRAP1Q12931 704 aaKnown RBP8.75□□□□□ -1.01
RFFL-210ENST00000582308 TUBA3CQ13748 450 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 ZNF141Q15928 474 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 KLHL26Q53HC5 615 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 PDZK1Q5T2W1 519 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 INTS11Q5TA45 600 aaKnown RBP8.75□□□□□ -1.01
RFFL-210ENST00000582308 BICRALQ6AI39 1079 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 TUBA3EQ6PEY2 450 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 IGFL2Q6UWQ7 119 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 ZNF771Q7L3S4 317 aaPredicted RBP8.75□□□□□ -1.01
RFFL-210ENST00000582308 PATL1Q86TB9 770 aaKnown RBP8.75□□□□□ -1.01
RFFL-210ENST00000582308 VRK2Q86Y07 508 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 FAM13CQ8NE31 585 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 SPPL2AQ8TCT8 520 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 GRHL3Q8TE85 626 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 RNF138Q8WVD3 245 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 TTC9Q92623 222 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 PMM1Q92871 262 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 EXTL1Q92935 676 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 ASB9Q96DX5 294 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 NODALQ96S42 347 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 SMAD5Q99717 465 aaKnown RBP8.75□□□□□ -1.01
RFFL-210ENST00000582308 UTP23Q9BRU9 249 aaKnown RBP8.75□□□□□ -1.01
RFFL-210ENST00000582308 RTN4RQ9BZR6 473 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 PRORYQ9H606 182 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 GORASP2Q9H8Y8 452 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 UBQLN4Q9NRR5 601 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 HPF1Q9NWY4 346 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 ACTR3BQ9P1U1 418 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 MAGEL2Q9UJ55 1249 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 POMPQ9Y244 141 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 PCDHGA9Q9Y5G4 932 aaKnown RBP8.75□□□□□ -1.01
RFFL-210ENST00000582308 CHCHD2Q9Y6H1 151 aaPredicted RBP8.75□□□□□ -1.01
RFFL-210ENST00000582308 NBEAQ8NFP9 2946 aa8.75□□□□□ -1.01
RFFL-210ENST00000582308 PRRC2CQ9Y520 2896 aaKnown RBP8.75□□□□□ -1.01
RFFL-210ENST00000582308 MPDZO75970 2070 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 ITPR1Q14643 2758 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 BOD1L1Q8NFC6 3051 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 CLDN24A6NM45 220 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 K7EM74 188 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 CDK2AP1O14519 115 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 TP53I11O14683 189 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 TPST1O60507 370 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 NEURL1O76050 574 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 PDE9AO76083 593 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 OPN1SWP03999 348 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 ITGB2P05107 769 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 DBIP07108 87 aaKnown RBP8.74□□□□□ -1.01
RFFL-210ENST00000582308 NGFRP08138 427 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 CCL3P10147 92 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 CD247P20963 164 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 ATP6V1B2P21281 511 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 EVI2BP34910 448 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 PTGDSP41222 190 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 RNF144AP50876 292 aaPredicted RBP8.74□□□□□ -1.01
RFFL-210ENST00000582308 GAS1P54826 345 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 POLE2P56282 527 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 FOXK2Q01167 660 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 OC90Q02509 493 aaPredicted RBP8.74□□□□□ -1.01
RFFL-210ENST00000582308 LRRC23Q53EV4 343 aaPredicted RBP8.74□□□□□ -1.01
RFFL-210ENST00000582308 CYBRD1Q53TN4 286 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 SPINK14Q6IE38 97 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 LCN8Q6JVE9 175 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 CYP2R1Q6VVX0 501 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 RTL4Q6ZR62 310 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 MDGA2Q7Z553 956 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 DHFR2Q86XF0 187 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 KRT73Q86Y46 540 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 SPPL2CQ8IUH8 684 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 GPALPP1Q8IXQ4 340 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 PEX5LQ8IYB4 626 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 DND1Q8IYX4 353 aaKnown RBP8.74□□□□□ -1.01
RFFL-210ENST00000582308 CYP4Z2PQ8N1L4 340 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 CLIP4Q8N3C7 705 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 POGLUT1Q8NBL1 392 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 OR10Q1Q8NGQ4 319 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 OR52P1PQ8NH57 321 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 WDR60Q8WVS4 1066 aa8.74□□□□□ -1.01
RFFL-210ENST00000582308 HAS2Q92819 552 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms