RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 DUX1O43812 170 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 JAK2O60674 1132 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 NOL3O60936 208 aaKnown RBP3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 TSC22D2O75157 780 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 PEX11AO75192 247 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 STX11O75558 287 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 CSF2P04141 144 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 KRT6BP04259 564 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 H2AFXP16104 143 aaPredicted RBP3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 IL2RGP31785 369 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 RPL4P36578 427 aaKnown RBP3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 MAGEA5P43359 124 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 KRT6CP48668 564 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 ERVPABLB-1P60509 514 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 CXCL6P80162 114 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 OVGP1Q12889 678 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 CHI3L2Q15782 390 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 CYP51A1Q16850 503 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 LINC01620Q4KN68 170 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 STAC2Q6ZMT1 411 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 LRRC70Q7Z2Q7 622 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 BPIFB2Q8N4F0 458 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 CCDC26Q8TAB7 109 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 ADAMTS16Q8TE57 1224 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 GTSF1Q8WW33 167 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 SYAP1Q96A49 352 aaPredicted RBP3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 OR5M11Q96RB7 305 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 ELOVL4Q9GZR5 314 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 POLR3FQ9H1D9 316 aaPredicted RBP3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 DHX33Q9H6R0 707 aaKnown RBP3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 TMOD2Q9NZR1 351 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 ABCD2Q9UBJ2 740 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 TP53TG3Q9ULZ0 132 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 RNF6Q9Y252 685 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 GMPPBQ9Y5P6 360 aa3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 CFAP65Q6ZU64 1925 aaKnown RBP3.54□□□□□ -1.84
SMCHD1-205ENST00000581383 NOTCH2Q04721 2471 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 CARMIL1Q5VZK9 1371 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 MAPK13O15264 365 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 GPAA1O43292 621 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 RAMP1O60894 148 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 CHRNA1P02708 482 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 TSPY4P0CV99 314 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 TSPY10P0CW01 314 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 EPB41P11171 864 aaKnown RBP3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 GDF1P27539 372 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 ACAA2P42765 397 aaKnown RBP3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 SLC25A1P53007 311 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 SERTAD2Q14140 314 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 MAPK6Q16659 721 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 RIPPLY2Q5TAB7 128 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 VITQ6UXI7 678 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 TEX9Q8N6V9 391 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 CSNK1A1LQ8N752 337 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 FADS6Q8N9I5 356 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 ZSCAN4Q8NAM6 433 aaPredicted RBP3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 OR5AU1Q8NGC0 362 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 OR10T2Q8NGX3 314 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 C4orf36Q96KX1 117 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 GPA33Q99795 319 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 TPPP3Q9BW30 176 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 GALPQ9UBC7 116 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 LAMP5Q9UJQ1 280 aa3.53□□□□□ -1.84
SMCHD1-205ENST00000581383 IGHV3-35A0A0C4DH35 117 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 TRIM3O75382 744 aaPredicted RBP3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 DUSP14O95147 198 aaKnown RBP3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 H2AFZP0C0S5 128 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 FASP25445 335 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 GNPDA1P46926 289 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 NTHL1P78549 312 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 ASAH1Q13510 395 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 TGIF1Q15583 401 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 GSG1Q2KHT4 349 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 PAN3Q58A45 887 aaKnown RBP3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 NCR3LG1Q68D85 454 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 CGB2Q6NT52 195 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 C2orf66Q6UXQ4 117 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 ARMCX2Q7L311 632 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 CD177Q8N6Q3 437 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 CNIH3Q8TBE1 160 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 M1APQ8TC57 530 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 DTNBP1Q96EV8 351 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 SDSLQ96GA7 329 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 AKR1E2Q96JD6 320 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 CASD1Q96PB1 797 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 TSGA13Q96PP4 275 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 TSSK1BQ9BXA7 367 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 MIEF1Q9NQG6 463 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 EHFQ9NZC4 300 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 CGNQ9P2M7 1197 aaKnown RBP3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 EPS15L1Q9UBC2 864 aa3.52□□□□□ -1.85
SMCHD1-205ENST00000581383 A0A1B0GWJ7 208 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 SAGE2PA6NJ88 616 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 SRSF10O75494 262 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 ASNSP08243 561 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 HSPA5P11021 654 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 BCKDHAP12694 445 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 PTMSP20962 102 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 IGHV1-2P23083 117 aa3.51□□□□□ -1.85
SMCHD1-205ENST00000581383 HTR2AP28223 471 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms