RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 OR6C75A6NL08 312 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 GABRR3A8MPY1 467 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 C12orf71A8MTZ7 269 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 NBR2O15453 112 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 LINC01565O15544 149 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 ZNHIT1O43257 154 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 DUX1O43812 170 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 N4BP1O75113 896 aaKnown RBP2.78□□□□□ -1.96
KPNB1-208ENST00000580019 PRKRAO75569 313 aaKnown RBP2.78□□□□□ -1.96
KPNB1-208ENST00000580019 RFPL2O75678 378 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 FGFR1OPO95684 399 aaKnown RBP2.78□□□□□ -1.96
KPNB1-208ENST00000580019 SNAI1O95863 264 aaPredicted RBP2.78□□□□□ -1.96
KPNB1-208ENST00000580019 TGM6O95932 706 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 OPN1LWP04000 364 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 TPM3P06753 285 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 F7P08709 466 aaPredicted RBP2.78□□□□□ -1.96
KPNB1-208ENST00000580019 PRF1P14222 555 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 CCNB1P14635 433 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 POU2F1P14859 743 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 CYP11B1P15538 503 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 GPX3P22352 226 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 LHCGRP22888 699 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 TMPOP42166 694 aaKnown RBP2.78□□□□□ -1.96
KPNB1-208ENST00000580019 SLC1A4P43007 532 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 HTR5AP47898 357 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 TPMTP51580 245 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 CDH6P55285 790 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 RAB11AP62491 216 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 MRPS6P82932 125 aaKnown RBP2.78□□□□□ -1.96
KPNB1-208ENST00000580019 OTUD4Q01804 1114 aaKnown RBP2.78□□□□□ -1.96
KPNB1-208ENST00000580019 CCDC173Q0VFZ6 552 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 BST2Q10589 180 aaKnown RBP2.78□□□□□ -1.96
KPNB1-208ENST00000580019 PPIL2Q13356 520 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 KIR2DS5Q14953 304 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 INPP5JQ15735 1006 aaPredicted RBP2.78□□□□□ -1.96
KPNB1-208ENST00000580019 USF2Q15853 346 aaPredicted RBP2.78□□□□□ -1.96
KPNB1-208ENST00000580019 RAB11BQ15907 218 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 OTUD1Q5VV17 481 aaPredicted RBP2.78□□□□□ -1.96
KPNB1-208ENST00000580019 PLPP4Q5VZY2 271 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 TCEAL6Q6IPX3 200 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 FAM71F2Q6NXP2 309 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 TRIM65Q6PJ69 517 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 VITQ6UXI7 678 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 SCARA5Q6ZMJ2 495 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 CCNI2Q6ZMN8 369 aaPredicted RBP2.78□□□□□ -1.96
KPNB1-208ENST00000580019 CCDC80Q76M96 950 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 Q7L0L9 218 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 LINC00523Q86TU6 105 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 RANBP3LQ86VV4 465 aaPredicted RBP2.78□□□□□ -1.96
KPNB1-208ENST00000580019 CD302Q8IX05 232 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 MYOCDQ8IZQ8 938 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 EID3Q8N140 333 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 GTPBP8Q8N3Z3 284 aaPredicted RBP2.78□□□□□ -1.96
KPNB1-208ENST00000580019 CLDN19Q8N6F1 224 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 CCDC185Q8N715 623 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 LINC00469Q8N7U9 141 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 ASCC1Q8N9N2 400 aaKnown RBP2.78□□□□□ -1.96
KPNB1-208ENST00000580019 NFAM1Q8NET5 270 aaPredicted RBP2.78□□□□□ -1.96
KPNB1-208ENST00000580019 OR1L4Q8NGR5 311 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 RDH11Q8TC12 318 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 LKAAEAR1Q8TD35 194 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 PIBF1Q8WXW3 757 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 ELMO1Q92556 727 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 PIK3R3Q92569 461 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 SLCO2A1Q92959 643 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 SLC38A4Q969I6 547 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 SLC35C1Q96A29 364 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 ELMO2Q96JJ3 720 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 C8orf76Q96K31 380 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 LMLNQ96KR4 655 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 AMDHD1Q96NU7 426 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 DUX5Q96PT3 197 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 ERGIC2Q96RQ1 377 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 CCT8L2Q96SF2 557 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 RIT2Q99578 217 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 COPS8Q99627 209 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 KCNS3Q9BQ31 491 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 LZTS2Q9BRK4 669 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 TUBGCP2Q9BSJ2 902 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 C20orf24Q9BUV8 137 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 TSSK1BQ9BXA7 367 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 PARD6BQ9BYG5 372 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 IL22Q9GZX6 179 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 IL1RL2Q9HB29 575 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 RAB18Q9NP72 206 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 TREM1Q9NP99 234 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 POLE4Q9NR33 117 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 FGF21Q9NSA1 209 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 C20orf96Q9NUD7 363 aaPredicted RBP2.78□□□□□ -1.96
KPNB1-208ENST00000580019 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.78□□□□□ -1.96
KPNB1-208ENST00000580019 NUDT15Q9NV35 164 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 QPCTLQ9NXS2 382 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 TECRQ9NZ01 308 aaKnown RBP2.78□□□□□ -1.96
KPNB1-208ENST00000580019 KLRF1Q9NZS2 232 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.78□□□□□ -1.96
KPNB1-208ENST00000580019 GNG12Q9UBI6 72 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 FBXL4Q9UKA2 621 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 IKZF2Q9UKS7 526 aa2.78□□□□□ -1.96
KPNB1-208ENST00000580019 EMCNQ9ULC0 261 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms