RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 LRRC69Q6ZNQ3 347 aa9.89□□□□□ -0.83
SS18-213ENST00000579640 C16orf47Q6ZP98 133 aaPredicted RBP9.89□□□□□ -0.83
SS18-213ENST00000579640 ZAR1Q86SH2 424 aa9.89□□□□□ -0.83
SS18-213ENST00000579640 GALNT10Q86SR1 603 aa9.89□□□□□ -0.83
SS18-213ENST00000579640 SPACA3Q8IXA5 215 aa9.89□□□□□ -0.83
SS18-213ENST00000579640 GALNT16Q8N428 558 aa9.89□□□□□ -0.83
SS18-213ENST00000579640 ASB15Q8WXK1 588 aa9.89□□□□□ -0.83
SS18-213ENST00000579640 PSMF1Q92530 271 aa9.89□□□□□ -0.83
SS18-213ENST00000579640 STMN2Q93045 179 aa9.89□□□□□ -0.83
SS18-213ENST00000579640 TMCO6Q96DC7 493 aa9.89□□□□□ -0.83
SS18-213ENST00000579640 SPACA9Q96E40 222 aaPredicted RBP9.89□□□□□ -0.83
SS18-213ENST00000579640 PYURFQ96I23 114 aa9.89□□□□□ -0.83
SS18-213ENST00000579640 ING2Q9H160 280 aa9.89□□□□□ -0.83
SS18-213ENST00000579640 MAGIXQ9H6Y5 334 aa9.89□□□□□ -0.83
SS18-213ENST00000579640 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.89□□□□□ -0.83
SS18-213ENST00000579640 ANAPC2Q9UJX6 822 aa9.89□□□□□ -0.83
SS18-213ENST00000579640 SLC13A4Q9UKG4 626 aa9.89□□□□□ -0.83
SS18-213ENST00000579640 SCDO00767 359 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 TP53I11O14683 189 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 UGT2B11O75310 529 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 ENTPD5O75356 428 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 PRKD3O94806 890 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 CYP4B1P13584 511 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 NID1P14543 1247 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 HPGDP15428 266 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 CD247P20963 164 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 TBXA2RP21731 343 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 SLC7A1P30825 629 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 UCNP55089 124 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 CHRNB3Q05901 458 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 NTRK2Q16620 822 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 FAM98BQ52LJ0 330 aaKnown RBP9.88□□□□□ -0.83
SS18-213ENST00000579640 ACER2Q5QJU3 275 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 ABHD17BQ5VST6 288 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 RNF220Q5VTB9 566 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 AAGABQ6PD74 315 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 APLFQ8IW19 511 aaPredicted RBP9.88□□□□□ -0.83
SS18-213ENST00000579640 CMIPQ8IY22 773 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 ADGRG5Q8IZF4 528 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 TMEM156Q8N614 296 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 SIRT6Q8N6T7 355 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 PROX1Q92786 737 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 ZG16BQ96DA0 208 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 HSH2DQ96JZ2 352 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 SECISBP2Q96T21 854 aaKnown RBP9.88□□□□□ -0.83
SS18-213ENST00000579640 QRSL1Q9H0R6 528 aaKnown RBP9.88□□□□□ -0.83
SS18-213ENST00000579640 ZBTB20Q9HC78 741 aaPredicted RBP9.88□□□□□ -0.83
SS18-213ENST00000579640 HHATLQ9HCP6 504 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 CCM2LQ9NUG4 571 aaPredicted RBP9.88□□□□□ -0.83
SS18-213ENST00000579640 KLHL28Q9NXS3 571 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 ABCG2Q9UNQ0 655 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 ZNF443Q9Y2A4 671 aaPredicted RBP9.88□□□□□ -0.83
SS18-213ENST00000579640 DTNAQ9Y4J8 743 aa9.88□□□□□ -0.83
SS18-213ENST00000579640 EXPH5Q8NEV8 1989 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 A0A1W2PQD3 144 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 H3BNH8 94 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 ZNF354AO60765 605 aaPredicted RBP9.87□□□□□ -0.83
SS18-213ENST00000579640 OXSR1O95747 527 aaPredicted RBP9.87□□□□□ -0.83
SS18-213ENST00000579640 FESP07332 822 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 ADH7P40394 386 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 SOX3P41225 446 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 CLK3P49761 638 aaKnown RBP9.87□□□□□ -0.83
SS18-213ENST00000579640 FGFBP1Q14512 234 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 MAPK14Q16539 360 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 DUSP7Q16829 419 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 ZNF791Q3KP31 576 aaPredicted RBP9.87□□□□□ -0.83
SS18-213ENST00000579640 GRAMD1BQ3KR37 738 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 IFI44LQ53G44 452 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 KLHL26Q53HC5 615 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 PDZK1Q5T2W1 519 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 FCRLBQ6BAA4 426 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 ENPP6Q6UWR7 440 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 FKBP9P1Q75LS8 142 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 VRK2Q86Y07 508 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 SMYD1Q8NB12 490 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 OR4C3Q8NH37 302 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 CANT1Q8WVQ1 401 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 GEMIN6Q8WXD5 167 aaKnown RBP9.87□□□□□ -0.83
SS18-213ENST00000579640 HGDQ93099 445 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 SLC35B4Q969S0 331 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 SLC47A1Q96FL8 570 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 TPD52L3Q96J77 140 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 SGCZQ96LD1 299 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 YY1AP1Q9H869 796 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 KCNE5Q9UJ90 142 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 SLC35A3Q9Y2D2 325 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 SLC9A8Q9Y2E8 581 aa9.87□□□□□ -0.83
SS18-213ENST00000579640 DCHS1Q96JQ0 3298 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 NPIPA5A0A0B4J1W7 369 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 SERINC4A6NH21 518 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 TMEM229AB2RXF0 380 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 ALG1L2C9J202 215 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 NPIPA7E9PJI5 369 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 ICOSLGO75144 302 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 LGI1O95970 557 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 NPIPA8P0DM63 369 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 RAP2AP10114 183 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 EVI2BP34910 448 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 CASRP41180 1078 aa9.86□□□□□ -0.83
SS18-213ENST00000579640 FBXW4P57775 412 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms